Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.52■□□□□ 0.72
VPS11Q9H270 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VPS11Q9H270 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.52■□□□□ 0.72
VPS11Q9H270 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VPS11Q9H270 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.52■□□□□ 0.72
VPS11Q9H270 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.52■□□□□ 0.72
VPS11Q9H270 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VPS11Q9H270 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.52■□□□□ 0.72
VPS11Q9H270 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.52■□□□□ 0.72
VPS11Q9H270 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VPS11Q9H270 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
VPS11Q9H270 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
VPS11Q9H270 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
VPS11Q9H270 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.52■□□□□ 0.71
VPS11Q9H270 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
VPS11Q9H270 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
VPS11Q9H270 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
VPS11Q9H270 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
VPS11Q9H270 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.52■□□□□ 0.71
VPS11Q9H270 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.51■□□□□ 0.71
VPS11Q9H270 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
VPS11Q9H270 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VPS11Q9H270 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VPS11Q9H270 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VPS11Q9H270 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.51■□□□□ 0.71
VPS11Q9H270 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VPS11Q9H270 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
VPS11Q9H270 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VPS11Q9H270 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
VPS11Q9H270 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
VPS11Q9H270 AC026271.2-201ENST00000428091 497 ntBASIC19.51■□□□□ 0.71
VPS11Q9H270 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VPS11Q9H270 AC079598.2-202ENST00000546624 1451 ntBASIC19.51■□□□□ 0.71
VPS11Q9H270 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.51■□□□□ 0.71
VPS11Q9H270 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VPS11Q9H270 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
VPS11Q9H270 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VPS11Q9H270 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
VPS11Q9H270 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.51■□□□□ 0.71
VPS11Q9H270 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
VPS11Q9H270 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VPS11Q9H270 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VPS11Q9H270 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
VPS11Q9H270 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VPS11Q9H270 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.51■□□□□ 0.71
VPS11Q9H270 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS11Q9H270 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
VPS11Q9H270 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VPS11Q9H270 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS11Q9H270 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS11Q9H270 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS11Q9H270 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VPS11Q9H270 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS11Q9H270 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS11Q9H270 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS11Q9H270 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
VPS11Q9H270 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VPS11Q9H270 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VPS11Q9H270 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.5■□□□□ 0.71
VPS11Q9H270 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
VPS11Q9H270 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.5■□□□□ 0.71
VPS11Q9H270 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
VPS11Q9H270 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VPS11Q9H270 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VPS11Q9H270 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS11Q9H270 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS11Q9H270 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VPS11Q9H270 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS11Q9H270 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.5■□□□□ 0.71
VPS11Q9H270 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS11Q9H270 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS11Q9H270 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VPS11Q9H270 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.5■□□□□ 0.71
VPS11Q9H270 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS11Q9H270 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
VPS11Q9H270 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VPS11Q9H270 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VPS11Q9H270 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
VPS11Q9H270 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VPS11Q9H270 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
VPS11Q9H270 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VPS11Q9H270 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.49■□□□□ 0.71
VPS11Q9H270 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.49■□□□□ 0.71
VPS11Q9H270 RARRES2P6-201ENST00000567333 442 ntBASIC19.49■□□□□ 0.71
VPS11Q9H270 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.49■□□□□ 0.71
VPS11Q9H270 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
VPS11Q9H270 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.49■□□□□ 0.71
VPS11Q9H270 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.49■□□□□ 0.71
VPS11Q9H270 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.49■□□□□ 0.71
VPS11Q9H270 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VPS11Q9H270 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VPS11Q9H270 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VPS11Q9H270 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VPS11Q9H270 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.49■□□□□ 0.71
VPS11Q9H270 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VPS11Q9H270 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
VPS11Q9H270 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VPS11Q9H270 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
VPS11Q9H270 AL049812.1-201ENST00000432563 2267 ntBASIC19.49■□□□□ 0.71
VPS11Q9H270 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms