Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
DDX47Q9H0S4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX47Q9H0S4 KRT17P1-201ENST00000399211 1546 ntBASIC20.23■□□□□ 0.83
DDX47Q9H0S4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.23■□□□□ 0.83
DDX47Q9H0S4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DDX47Q9H0S4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.23■□□□□ 0.83
DDX47Q9H0S4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX47Q9H0S4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX47Q9H0S4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX47Q9H0S4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX47Q9H0S4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.23■□□□□ 0.83
DDX47Q9H0S4 AC010980.2-201ENST00000587099 1412 ntBASIC20.23■□□□□ 0.83
DDX47Q9H0S4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX47Q9H0S4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX47Q9H0S4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
DDX47Q9H0S4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX47Q9H0S4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
DDX47Q9H0S4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
DDX47Q9H0S4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX47Q9H0S4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DDX47Q9H0S4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX47Q9H0S4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
DDX47Q9H0S4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
DDX47Q9H0S4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
DDX47Q9H0S4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX47Q9H0S4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX47Q9H0S4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX47Q9H0S4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.22■□□□□ 0.83
DDX47Q9H0S4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX47Q9H0S4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX47Q9H0S4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.22■□□□□ 0.83
DDX47Q9H0S4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX47Q9H0S4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX47Q9H0S4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.22■□□□□ 0.83
DDX47Q9H0S4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.22■□□□□ 0.83
DDX47Q9H0S4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.22■□□□□ 0.83
DDX47Q9H0S4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.22■□□□□ 0.83
DDX47Q9H0S4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.22■□□□□ 0.83
DDX47Q9H0S4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.22■□□□□ 0.83
DDX47Q9H0S4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
DDX47Q9H0S4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX47Q9H0S4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.22■□□□□ 0.83
DDX47Q9H0S4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX47Q9H0S4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX47Q9H0S4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
DDX47Q9H0S4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
DDX47Q9H0S4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.21■□□□□ 0.83
DDX47Q9H0S4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX47Q9H0S4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX47Q9H0S4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX47Q9H0S4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX47Q9H0S4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX47Q9H0S4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX47Q9H0S4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.21■□□□□ 0.83
DDX47Q9H0S4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.21■□□□□ 0.83
DDX47Q9H0S4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.21■□□□□ 0.83
DDX47Q9H0S4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.21■□□□□ 0.83
DDX47Q9H0S4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DDX47Q9H0S4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.21■□□□□ 0.83
DDX47Q9H0S4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.21■□□□□ 0.83
DDX47Q9H0S4 AC008694.1-202ENST00000636953 945 ntBASIC20.21■□□□□ 0.83
DDX47Q9H0S4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.21■□□□□ 0.83
DDX47Q9H0S4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DDX47Q9H0S4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX47Q9H0S4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.21■□□□□ 0.83
DDX47Q9H0S4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
DDX47Q9H0S4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.21■□□□□ 0.83
DDX47Q9H0S4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.21■□□□□ 0.83
DDX47Q9H0S4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DDX47Q9H0S4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX47Q9H0S4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX47Q9H0S4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DDX47Q9H0S4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.21■□□□□ 0.83
DDX47Q9H0S4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.2■□□□□ 0.82
DDX47Q9H0S4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX47Q9H0S4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX47Q9H0S4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.2■□□□□ 0.82
DDX47Q9H0S4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX47Q9H0S4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX47Q9H0S4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.2■□□□□ 0.82
DDX47Q9H0S4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX47Q9H0S4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.2■□□□□ 0.82
DDX47Q9H0S4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX47Q9H0S4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX47Q9H0S4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
DDX47Q9H0S4 AC016769.1-201ENST00000409132 1010 ntBASIC20.2■□□□□ 0.82
DDX47Q9H0S4 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.2■□□□□ 0.82
DDX47Q9H0S4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.2■□□□□ 0.82
DDX47Q9H0S4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DDX47Q9H0S4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.2■□□□□ 0.82
DDX47Q9H0S4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.2■□□□□ 0.82
DDX47Q9H0S4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX47Q9H0S4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX47Q9H0S4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.2■□□□□ 0.82
DDX47Q9H0S4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX47Q9H0S4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX47Q9H0S4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX47Q9H0S4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.2■□□□□ 0.82
DDX47Q9H0S4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX47Q9H0S4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms