Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COMMD4Q9H0A8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.15■□□□□ 0.34
COMMD4Q9H0A8 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COMMD4Q9H0A8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.15■□□□□ 0.34
COMMD4Q9H0A8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
COMMD4Q9H0A8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COMMD4Q9H0A8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COMMD4Q9H0A8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.14■□□□□ 0.33
COMMD4Q9H0A8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COMMD4Q9H0A8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COMMD4Q9H0A8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COMMD4Q9H0A8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
COMMD4Q9H0A8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.14■□□□□ 0.33
COMMD4Q9H0A8 KRT18P5-201ENST00000436075 1291 ntBASIC17.14■□□□□ 0.33
COMMD4Q9H0A8 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.14■□□□□ 0.33
COMMD4Q9H0A8 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.14■□□□□ 0.33
COMMD4Q9H0A8 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.14■□□□□ 0.33
COMMD4Q9H0A8 C2orf69P4-201ENST00000565394 541 ntBASIC17.14■□□□□ 0.33
COMMD4Q9H0A8 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.14■□□□□ 0.33
COMMD4Q9H0A8 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.14■□□□□ 0.33
COMMD4Q9H0A8 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.14■□□□□ 0.33
COMMD4Q9H0A8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.14■□□□□ 0.33
COMMD4Q9H0A8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
COMMD4Q9H0A8 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.14■□□□□ 0.33
COMMD4Q9H0A8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.14■□□□□ 0.33
COMMD4Q9H0A8 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
COMMD4Q9H0A8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COMMD4Q9H0A8 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COMMD4Q9H0A8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.14■□□□□ 0.33
COMMD4Q9H0A8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
COMMD4Q9H0A8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD4Q9H0A8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.13■□□□□ 0.33
COMMD4Q9H0A8 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.13■□□□□ 0.33
COMMD4Q9H0A8 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD4Q9H0A8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.13■□□□□ 0.33
COMMD4Q9H0A8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD4Q9H0A8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD4Q9H0A8 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD4Q9H0A8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD4Q9H0A8 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD4Q9H0A8 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
COMMD4Q9H0A8 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD4Q9H0A8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.13■□□□□ 0.33
COMMD4Q9H0A8 AC026271.2-201ENST00000428091 497 ntBASIC17.13■□□□□ 0.33
COMMD4Q9H0A8 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.13■□□□□ 0.33
COMMD4Q9H0A8 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.13■□□□□ 0.33
COMMD4Q9H0A8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.13■□□□□ 0.33
COMMD4Q9H0A8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.13■□□□□ 0.33
COMMD4Q9H0A8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.13■□□□□ 0.33
COMMD4Q9H0A8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD4Q9H0A8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD4Q9H0A8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD4Q9H0A8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD4Q9H0A8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD4Q9H0A8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD4Q9H0A8 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD4Q9H0A8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD4Q9H0A8 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD4Q9H0A8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD4Q9H0A8 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.13■□□□□ 0.33
COMMD4Q9H0A8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD4Q9H0A8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.12■□□□□ 0.33
COMMD4Q9H0A8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD4Q9H0A8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD4Q9H0A8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.12■□□□□ 0.33
COMMD4Q9H0A8 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
COMMD4Q9H0A8 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD4Q9H0A8 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD4Q9H0A8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD4Q9H0A8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
COMMD4Q9H0A8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.12■□□□□ 0.33
COMMD4Q9H0A8 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD4Q9H0A8 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD4Q9H0A8 CYP2T1P-201ENST00000432607 1285 ntBASIC17.12■□□□□ 0.33
COMMD4Q9H0A8 CNN2P6-201ENST00000439038 900 ntBASIC17.12■□□□□ 0.33
COMMD4Q9H0A8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.12■□□□□ 0.33
COMMD4Q9H0A8 RARRES2P6-201ENST00000567333 442 ntBASIC17.12■□□□□ 0.33
COMMD4Q9H0A8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.12■□□□□ 0.33
COMMD4Q9H0A8 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD4Q9H0A8 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
COMMD4Q9H0A8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD4Q9H0A8 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD4Q9H0A8 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
COMMD4Q9H0A8 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD4Q9H0A8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD4Q9H0A8 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.12■□□□□ 0.33
COMMD4Q9H0A8 AL138781.2-201ENST00000617896 1843 ntBASIC17.12■□□□□ 0.33
COMMD4Q9H0A8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD4Q9H0A8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.12■□□□□ 0.33
COMMD4Q9H0A8 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.12■□□□□ 0.33
COMMD4Q9H0A8 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD4Q9H0A8 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD4Q9H0A8 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD4Q9H0A8 PKD1P1-201ENST00000458669 6805 ntBASIC17.11■□□□□ 0.33
COMMD4Q9H0A8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD4Q9H0A8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD4Q9H0A8 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD4Q9H0A8 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
COMMD4Q9H0A8 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.11■□□□□ 0.33
COMMD4Q9H0A8 AL355472.2-201ENST00000422958 438 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms