Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.69■□□□□ 0.74
PHACTR1Q9C0D0 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.69■□□□□ 0.74
PHACTR1Q9C0D0 Z98044.1-201ENST00000632503 1764 ntBASIC19.69■□□□□ 0.74
PHACTR1Q9C0D0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.69■□□□□ 0.74
PHACTR1Q9C0D0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PHACTR1Q9C0D0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PHACTR1Q9C0D0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHACTR1Q9C0D0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.69■□□□□ 0.74
PHACTR1Q9C0D0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
PHACTR1Q9C0D0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHACTR1Q9C0D0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PHACTR1Q9C0D0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHACTR1Q9C0D0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.68■□□□□ 0.74
PHACTR1Q9C0D0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PHACTR1Q9C0D0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PHACTR1Q9C0D0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHACTR1Q9C0D0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHACTR1Q9C0D0 AC104417.2-201ENST00000562989 1793 ntBASIC19.68■□□□□ 0.74
PHACTR1Q9C0D0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PHACTR1Q9C0D0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.68■□□□□ 0.74
PHACTR1Q9C0D0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHACTR1Q9C0D0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.68■□□□□ 0.74
PHACTR1Q9C0D0 AC005181.1-201ENST00000604782 1256 ntBASIC19.68■□□□□ 0.74
PHACTR1Q9C0D0 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PHACTR1Q9C0D0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHACTR1Q9C0D0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.68■□□□□ 0.74
PHACTR1Q9C0D0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.68■□□□□ 0.74
PHACTR1Q9C0D0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.68■□□□□ 0.74
PHACTR1Q9C0D0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
PHACTR1Q9C0D0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PHACTR1Q9C0D0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.68■□□□□ 0.74
PHACTR1Q9C0D0 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHACTR1Q9C0D0 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
PHACTR1Q9C0D0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHACTR1Q9C0D0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PHACTR1Q9C0D0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHACTR1Q9C0D0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
PHACTR1Q9C0D0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PHACTR1Q9C0D0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHACTR1Q9C0D0 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHACTR1Q9C0D0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.67■□□□□ 0.74
PHACTR1Q9C0D0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHACTR1Q9C0D0 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHACTR1Q9C0D0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.67■□□□□ 0.74
PHACTR1Q9C0D0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHACTR1Q9C0D0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
PHACTR1Q9C0D0 AL390719.1-204ENST00000412397 1219 ntBASIC19.67■□□□□ 0.74
PHACTR1Q9C0D0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.67■□□□□ 0.74
PHACTR1Q9C0D0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHACTR1Q9C0D0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PHACTR1Q9C0D0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PHACTR1Q9C0D0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PHACTR1Q9C0D0 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.67■□□□□ 0.74
PHACTR1Q9C0D0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.67■□□□□ 0.74
PHACTR1Q9C0D0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHACTR1Q9C0D0 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PHACTR1Q9C0D0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
PHACTR1Q9C0D0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PHACTR1Q9C0D0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHACTR1Q9C0D0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHACTR1Q9C0D0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHACTR1Q9C0D0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.66■□□□□ 0.74
PHACTR1Q9C0D0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PHACTR1Q9C0D0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PHACTR1Q9C0D0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.66■□□□□ 0.74
PHACTR1Q9C0D0 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHACTR1Q9C0D0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHACTR1Q9C0D0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.66■□□□□ 0.74
PHACTR1Q9C0D0 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.66■□□□□ 0.74
PHACTR1Q9C0D0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PHACTR1Q9C0D0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PHACTR1Q9C0D0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHACTR1Q9C0D0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PHACTR1Q9C0D0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.66■□□□□ 0.74
PHACTR1Q9C0D0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.66■□□□□ 0.74
PHACTR1Q9C0D0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHACTR1Q9C0D0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHACTR1Q9C0D0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.66■□□□□ 0.74
PHACTR1Q9C0D0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.66■□□□□ 0.74
PHACTR1Q9C0D0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PHACTR1Q9C0D0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PHACTR1Q9C0D0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PHACTR1Q9C0D0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHACTR1Q9C0D0 FP475955.4-201ENST00000623131 1990 ntBASIC19.65■□□□□ 0.74
PHACTR1Q9C0D0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.65■□□□□ 0.74
PHACTR1Q9C0D0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHACTR1Q9C0D0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHACTR1Q9C0D0 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.65■□□□□ 0.74
PHACTR1Q9C0D0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
PHACTR1Q9C0D0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.65■□□□□ 0.74
PHACTR1Q9C0D0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHACTR1Q9C0D0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.65■□□□□ 0.74
PHACTR1Q9C0D0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.65■□□□□ 0.74
PHACTR1Q9C0D0 AC022517.1-201ENST00000592429 346 ntBASIC19.65■□□□□ 0.74
PHACTR1Q9C0D0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.65■□□□□ 0.74
PHACTR1Q9C0D0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
PHACTR1Q9C0D0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PHACTR1Q9C0D0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.65■□□□□ 0.74
PHACTR1Q9C0D0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
PHACTR1Q9C0D0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms