Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.29■□□□□ 0.84
LRRC3Q9BY71 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.29■□□□□ 0.84
LRRC3Q9BY71 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.29■□□□□ 0.84
LRRC3Q9BY71 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LRRC3Q9BY71 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC3Q9BY71 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
LRRC3Q9BY71 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
LRRC3Q9BY71 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.29■□□□□ 0.84
LRRC3Q9BY71 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC3Q9BY71 LINC01465-201ENST00000408887 1940 ntBASIC20.29■□□□□ 0.84
LRRC3Q9BY71 LINC01521-201ENST00000504184 1943 ntBASIC20.29■□□□□ 0.84
LRRC3Q9BY71 AL157384.1-201ENST00000445995 2473 ntBASIC20.29■□□□□ 0.84
LRRC3Q9BY71 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC3Q9BY71 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
LRRC3Q9BY71 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC3Q9BY71 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC3Q9BY71 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC3Q9BY71 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
LRRC3Q9BY71 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.28■□□□□ 0.84
LRRC3Q9BY71 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.28■□□□□ 0.84
LRRC3Q9BY71 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.28■□□□□ 0.84
LRRC3Q9BY71 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC3Q9BY71 AL023803.3-201ENST00000615559 522 ntBASIC20.28■□□□□ 0.84
LRRC3Q9BY71 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC3Q9BY71 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LRRC3Q9BY71 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC3Q9BY71 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC3Q9BY71 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LRRC3Q9BY71 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC3Q9BY71 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
LRRC3Q9BY71 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC3Q9BY71 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC3Q9BY71 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC3Q9BY71 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC3Q9BY71 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC3Q9BY71 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
LRRC3Q9BY71 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC3Q9BY71 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC3Q9BY71 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC3Q9BY71 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.27■□□□□ 0.84
LRRC3Q9BY71 LIN28AP1-201ENST00000429574 405 ntBASIC20.27■□□□□ 0.84
LRRC3Q9BY71 SLC25A1P2-201ENST00000430693 912 ntBASIC20.27■□□□□ 0.84
LRRC3Q9BY71 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
LRRC3Q9BY71 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
LRRC3Q9BY71 AL138966.2-201ENST00000621997 464 ntBASIC20.27■□□□□ 0.84
LRRC3Q9BY71 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC3Q9BY71 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC3Q9BY71 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.27■□□□□ 0.84
LRRC3Q9BY71 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.27■□□□□ 0.83
LRRC3Q9BY71 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.27■□□□□ 0.83
LRRC3Q9BY71 KRT8P41-201ENST00000533985 1514 ntBASIC20.27■□□□□ 0.83
LRRC3Q9BY71 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.27■□□□□ 0.83
LRRC3Q9BY71 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.27■□□□□ 0.83
LRRC3Q9BY71 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
LRRC3Q9BY71 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LRRC3Q9BY71 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
LRRC3Q9BY71 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.26■□□□□ 0.83
LRRC3Q9BY71 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.26■□□□□ 0.83
LRRC3Q9BY71 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
LRRC3Q9BY71 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC3Q9BY71 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC3Q9BY71 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.26■□□□□ 0.83
LRRC3Q9BY71 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC3Q9BY71 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC3Q9BY71 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC3Q9BY71 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC3Q9BY71 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC3Q9BY71 HMGA1P5-201ENST00000412453 271 ntBASIC20.26■□□□□ 0.83
LRRC3Q9BY71 AC007663.1-201ENST00000438948 1240 ntBASIC20.26■□□□□ 0.83
LRRC3Q9BY71 WWOX-216ENST00000569818 525 ntBASIC20.26■□□□□ 0.83
LRRC3Q9BY71 NTF6B-201ENST00000591913 560 ntBASIC20.26■□□□□ 0.83
LRRC3Q9BY71 AC116562.4-202ENST00000641738 218 ntBASIC20.26■□□□□ 0.83
LRRC3Q9BY71 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC3Q9BY71 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.26■□□□□ 0.83
LRRC3Q9BY71 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC3Q9BY71 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC3Q9BY71 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC3Q9BY71 AC092338.2-201ENST00000568827 1415 ntBASIC20.26■□□□□ 0.83
LRRC3Q9BY71 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC3Q9BY71 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.26■□□□□ 0.83
LRRC3Q9BY71 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC3Q9BY71 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC3Q9BY71 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
LRRC3Q9BY71 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC3Q9BY71 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.25■□□□□ 0.83
LRRC3Q9BY71 GABARAPL3-202ENST00000624044 1851 ntBASIC20.25■□□□□ 0.83
LRRC3Q9BY71 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
LRRC3Q9BY71 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.25■□□□□ 0.83
LRRC3Q9BY71 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC3Q9BY71 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC3Q9BY71 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.25■□□□□ 0.83
LRRC3Q9BY71 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC3Q9BY71 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.25■□□□□ 0.83
LRRC3Q9BY71 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.25■□□□□ 0.83
LRRC3Q9BY71 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.25■□□□□ 0.83
LRRC3Q9BY71 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC3Q9BY71 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.25■□□□□ 0.83
LRRC3Q9BY71 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
LRRC3Q9BY71 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC3Q9BY71 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms