Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM62Q9BVG3 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.28■□□□□ 0.84
TRIM62Q9BVG3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM62Q9BVG3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.28■□□□□ 0.84
TRIM62Q9BVG3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.28■□□□□ 0.84
TRIM62Q9BVG3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM62Q9BVG3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM62Q9BVG3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM62Q9BVG3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.28■□□□□ 0.84
TRIM62Q9BVG3 AL031985.4-201ENST00000642138 673 ntBASIC20.28■□□□□ 0.84
TRIM62Q9BVG3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM62Q9BVG3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM62Q9BVG3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM62Q9BVG3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM62Q9BVG3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
TRIM62Q9BVG3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TRIM62Q9BVG3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM62Q9BVG3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIM62Q9BVG3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM62Q9BVG3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM62Q9BVG3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
TRIM62Q9BVG3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM62Q9BVG3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM62Q9BVG3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM62Q9BVG3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM62Q9BVG3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM62Q9BVG3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM62Q9BVG3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.27■□□□□ 0.84
TRIM62Q9BVG3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.27■□□□□ 0.84
TRIM62Q9BVG3 Z99916.2-201ENST00000604037 246 ntBASIC20.27■□□□□ 0.84
TRIM62Q9BVG3 CD177P1-201ENST00000606252 935 ntBASIC20.27■□□□□ 0.84
TRIM62Q9BVG3 AC066615.1-201ENST00000640911 628 ntBASIC20.27■□□□□ 0.84
TRIM62Q9BVG3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM62Q9BVG3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TRIM62Q9BVG3 ZNF815P-204ENST00000434898 1737 ntBASIC20.27■□□□□ 0.83
TRIM62Q9BVG3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRIM62Q9BVG3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRIM62Q9BVG3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TRIM62Q9BVG3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
TRIM62Q9BVG3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM62Q9BVG3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM62Q9BVG3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM62Q9BVG3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
TRIM62Q9BVG3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM62Q9BVG3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM62Q9BVG3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM62Q9BVG3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
TRIM62Q9BVG3 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.26■□□□□ 0.83
TRIM62Q9BVG3 AC093827.2-201ENST00000512654 315 ntBASIC20.26■□□□□ 0.83
TRIM62Q9BVG3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.26■□□□□ 0.83
TRIM62Q9BVG3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM62Q9BVG3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.26■□□□□ 0.83
TRIM62Q9BVG3 AL160286.2-201ENST00000567150 934 ntBASIC20.26■□□□□ 0.83
TRIM62Q9BVG3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.26■□□□□ 0.83
TRIM62Q9BVG3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM62Q9BVG3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM62Q9BVG3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM62Q9BVG3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM62Q9BVG3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM62Q9BVG3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM62Q9BVG3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
TRIM62Q9BVG3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM62Q9BVG3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.26■□□□□ 0.83
TRIM62Q9BVG3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
TRIM62Q9BVG3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM62Q9BVG3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM62Q9BVG3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM62Q9BVG3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TRIM62Q9BVG3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
TRIM62Q9BVG3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
TRIM62Q9BVG3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.25■□□□□ 0.83
TRIM62Q9BVG3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.25■□□□□ 0.83
TRIM62Q9BVG3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM62Q9BVG3 AC113410.3-201ENST00000623366 203 ntBASIC20.25■□□□□ 0.83
TRIM62Q9BVG3 CR392000.1-201ENST00000624770 1228 ntBASIC20.25■□□□□ 0.83
TRIM62Q9BVG3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.25■□□□□ 0.83
TRIM62Q9BVG3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM62Q9BVG3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM62Q9BVG3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM62Q9BVG3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TRIM62Q9BVG3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TRIM62Q9BVG3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM62Q9BVG3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM62Q9BVG3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM62Q9BVG3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM62Q9BVG3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM62Q9BVG3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM62Q9BVG3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM62Q9BVG3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM62Q9BVG3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM62Q9BVG3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM62Q9BVG3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM62Q9BVG3 AC125437.2-201ENST00000625180 2167 ntBASIC20.24■□□□□ 0.83
TRIM62Q9BVG3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.24■□□□□ 0.83
TRIM62Q9BVG3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TRIM62Q9BVG3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM62Q9BVG3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM62Q9BVG3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM62Q9BVG3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.24■□□□□ 0.83
TRIM62Q9BVG3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms