Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 GCK-205ENST00000437084 1385 ntTSL 5 BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 MIR935-201ENST00000401179 91 ntBASIC11.55□□□□□ -0.56
LIMD2Q9BT23 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 AC080038.1-201ENST00000611274 1154 ntBASIC11.55□□□□□ -0.56
LIMD2Q9BT23 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
LIMD2Q9BT23 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LIMD2Q9BT23 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LIMD2Q9BT23 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LIMD2Q9BT23 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LIMD2Q9BT23 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC11.54□□□□□ -0.56
LIMD2Q9BT23 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LIMD2Q9BT23 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC11.54□□□□□ -0.56
LIMD2Q9BT23 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LIMD2Q9BT23 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LIMD2Q9BT23 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LIMD2Q9BT23 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC11.54□□□□□ -0.56
LIMD2Q9BT23 AC010980.2-201ENST00000587099 1412 ntBASIC11.54□□□□□ -0.56
LIMD2Q9BT23 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC11.54□□□□□ -0.56
LIMD2Q9BT23 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC11.54□□□□□ -0.56
LIMD2Q9BT23 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
LIMD2Q9BT23 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC11.54□□□□□ -0.56
LIMD2Q9BT23 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LIMD2Q9BT23 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LIMD2Q9BT23 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC11.54□□□□□ -0.56
LIMD2Q9BT23 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LIMD2Q9BT23 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC11.54□□□□□ -0.56
LIMD2Q9BT23 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC11.54□□□□□ -0.56
LIMD2Q9BT23 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC11.54□□□□□ -0.56
LIMD2Q9BT23 AC133552.2-202ENST00000575694 574 ntBASIC11.54□□□□□ -0.56
LIMD2Q9BT23 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC11.54□□□□□ -0.56
LIMD2Q9BT23 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC11.54□□□□□ -0.56
LIMD2Q9BT23 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LIMD2Q9BT23 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC11.54□□□□□ -0.56
LIMD2Q9BT23 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC11.54□□□□□ -0.56
LIMD2Q9BT23 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LIMD2Q9BT23 MKRN4P-201ENST00000444706 1521 ntBASIC11.54□□□□□ -0.56
LIMD2Q9BT23 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LIMD2Q9BT23 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LIMD2Q9BT23 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LIMD2Q9BT23 BX119927.1-201ENST00000636596 1552 ntBASIC11.54□□□□□ -0.56
LIMD2Q9BT23 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LIMD2Q9BT23 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 USP39-204ENST00000409766 2033 ntTSL 2 BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 KRT8P17-201ENST00000453110 1448 ntBASIC11.53□□□□□ -0.56
LIMD2Q9BT23 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms