Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 AC016769.1-201ENST00000409132 1010 ntBASIC16.65■□□□□ 0.26
NICN1Q9BSH3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 AC023632.3-201ENST00000521633 145 ntBASIC16.65■□□□□ 0.26
NICN1Q9BSH3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 C2orf69P4-201ENST00000565394 541 ntBASIC16.65■□□□□ 0.26
NICN1Q9BSH3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 AC069236.1-201ENST00000604339 616 ntBASIC16.65■□□□□ 0.26
NICN1Q9BSH3 AC087623.3-201ENST00000607047 1098 ntBASIC16.65■□□□□ 0.26
NICN1Q9BSH3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
NICN1Q9BSH3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
NICN1Q9BSH3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
NICN1Q9BSH3 CROCCP3-202ENST00000420820 1947 ntBASIC16.64■□□□□ 0.26
NICN1Q9BSH3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.26
NICN1Q9BSH3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.64■□□□□ 0.25
NICN1Q9BSH3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NICN1Q9BSH3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.64■□□□□ 0.25
NICN1Q9BSH3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NICN1Q9BSH3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.64■□□□□ 0.25
NICN1Q9BSH3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NICN1Q9BSH3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.64■□□□□ 0.25
NICN1Q9BSH3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.64■□□□□ 0.25
NICN1Q9BSH3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NICN1Q9BSH3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NICN1Q9BSH3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.64■□□□□ 0.25
NICN1Q9BSH3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.64■□□□□ 0.25
NICN1Q9BSH3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
NICN1Q9BSH3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NICN1Q9BSH3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NICN1Q9BSH3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NICN1Q9BSH3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NICN1Q9BSH3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NICN1Q9BSH3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NICN1Q9BSH3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
NICN1Q9BSH3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NICN1Q9BSH3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NICN1Q9BSH3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.64■□□□□ 0.25
NICN1Q9BSH3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NICN1Q9BSH3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NICN1Q9BSH3 AL138781.2-201ENST00000617896 1843 ntBASIC16.63■□□□□ 0.25
NICN1Q9BSH3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NICN1Q9BSH3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NICN1Q9BSH3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NICN1Q9BSH3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NICN1Q9BSH3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NICN1Q9BSH3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
NICN1Q9BSH3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NICN1Q9BSH3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NICN1Q9BSH3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NICN1Q9BSH3 AC018553.1-201ENST00000616682 1458 ntBASIC16.63■□□□□ 0.25
NICN1Q9BSH3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.63■□□□□ 0.25
NICN1Q9BSH3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.63■□□□□ 0.25
NICN1Q9BSH3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NICN1Q9BSH3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NICN1Q9BSH3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.63■□□□□ 0.25
NICN1Q9BSH3 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.63■□□□□ 0.25
NICN1Q9BSH3 KRT18P5-201ENST00000436075 1291 ntBASIC16.63■□□□□ 0.25
NICN1Q9BSH3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.63■□□□□ 0.25
NICN1Q9BSH3 AL589743.5-201ENST00000616611 1050 ntBASIC16.63■□□□□ 0.25
NICN1Q9BSH3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.63■□□□□ 0.25
NICN1Q9BSH3 KRT17P1-201ENST00000399211 1546 ntBASIC16.63■□□□□ 0.25
NICN1Q9BSH3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.63■□□□□ 0.25
NICN1Q9BSH3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.63■□□□□ 0.25
NICN1Q9BSH3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NICN1Q9BSH3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NICN1Q9BSH3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.63■□□□□ 0.25
NICN1Q9BSH3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NICN1Q9BSH3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NICN1Q9BSH3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NICN1Q9BSH3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.63■□□□□ 0.25
NICN1Q9BSH3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.63■□□□□ 0.25
NICN1Q9BSH3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms