Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.93■□□□□ 0.62
EBF4Q9BQW3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EBF4Q9BQW3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
EBF4Q9BQW3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EBF4Q9BQW3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EBF4Q9BQW3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
EBF4Q9BQW3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.93■□□□□ 0.62
EBF4Q9BQW3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
EBF4Q9BQW3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
EBF4Q9BQW3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EBF4Q9BQW3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EBF4Q9BQW3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.93■□□□□ 0.62
EBF4Q9BQW3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EBF4Q9BQW3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.92■□□□□ 0.62
EBF4Q9BQW3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.92■□□□□ 0.62
EBF4Q9BQW3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EBF4Q9BQW3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EBF4Q9BQW3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EBF4Q9BQW3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
EBF4Q9BQW3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.92■□□□□ 0.62
EBF4Q9BQW3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EBF4Q9BQW3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.92■□□□□ 0.62
EBF4Q9BQW3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EBF4Q9BQW3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
EBF4Q9BQW3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EBF4Q9BQW3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
EBF4Q9BQW3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.92■□□□□ 0.62
EBF4Q9BQW3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EBF4Q9BQW3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EBF4Q9BQW3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
EBF4Q9BQW3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
EBF4Q9BQW3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EBF4Q9BQW3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
EBF4Q9BQW3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.92■□□□□ 0.62
EBF4Q9BQW3 PCDHB18P-201ENST00000524813 2368 ntBASIC18.92■□□□□ 0.62
EBF4Q9BQW3 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EBF4Q9BQW3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
EBF4Q9BQW3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EBF4Q9BQW3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
EBF4Q9BQW3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
EBF4Q9BQW3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.92■□□□□ 0.62
EBF4Q9BQW3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EBF4Q9BQW3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EBF4Q9BQW3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EBF4Q9BQW3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
EBF4Q9BQW3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EBF4Q9BQW3 AC079598.2-202ENST00000546624 1451 ntBASIC18.91■□□□□ 0.62
EBF4Q9BQW3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
EBF4Q9BQW3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
EBF4Q9BQW3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EBF4Q9BQW3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.91■□□□□ 0.62
EBF4Q9BQW3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EBF4Q9BQW3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.91■□□□□ 0.62
EBF4Q9BQW3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.91■□□□□ 0.62
EBF4Q9BQW3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.91■□□□□ 0.62
EBF4Q9BQW3 AC023632.3-201ENST00000521633 145 ntBASIC18.91■□□□□ 0.62
EBF4Q9BQW3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
EBF4Q9BQW3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.91■□□□□ 0.62
EBF4Q9BQW3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.91■□□□□ 0.62
EBF4Q9BQW3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.91■□□□□ 0.62
EBF4Q9BQW3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
EBF4Q9BQW3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
EBF4Q9BQW3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
EBF4Q9BQW3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EBF4Q9BQW3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EBF4Q9BQW3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
EBF4Q9BQW3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EBF4Q9BQW3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
EBF4Q9BQW3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.91■□□□□ 0.62
EBF4Q9BQW3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.9■□□□□ 0.62
EBF4Q9BQW3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.9■□□□□ 0.62
EBF4Q9BQW3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EBF4Q9BQW3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
EBF4Q9BQW3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EBF4Q9BQW3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EBF4Q9BQW3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EBF4Q9BQW3 AC093525.10-201ENST00000625130 1569 ntBASIC18.9■□□□□ 0.62
EBF4Q9BQW3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.9■□□□□ 0.62
EBF4Q9BQW3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.9■□□□□ 0.62
EBF4Q9BQW3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
EBF4Q9BQW3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.9■□□□□ 0.62
EBF4Q9BQW3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EBF4Q9BQW3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
EBF4Q9BQW3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EBF4Q9BQW3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
EBF4Q9BQW3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
EBF4Q9BQW3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
EBF4Q9BQW3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
EBF4Q9BQW3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EBF4Q9BQW3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EBF4Q9BQW3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
EBF4Q9BQW3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
EBF4Q9BQW3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
EBF4Q9BQW3 BICD1-207ENST00000551848 1962 ntBASIC18.9■□□□□ 0.62
EBF4Q9BQW3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EBF4Q9BQW3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
EBF4Q9BQW3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
EBF4Q9BQW3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.89■□□□□ 0.62
EBF4Q9BQW3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.89■□□□□ 0.62
EBF4Q9BQW3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms