Protein–RNA interactions for Protein: Q99853

FOXB1, Forkhead box protein B1, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXB1Q99853 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.1■□□□□ 0.33
FOXB1Q99853 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXB1Q99853 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.1■□□□□ 0.33
FOXB1Q99853 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
FOXB1Q99853 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.1■□□□□ 0.33
FOXB1Q99853 AC098590.1-201ENST00000468126 897 ntBASIC17.1■□□□□ 0.33
FOXB1Q99853 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXB1Q99853 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXB1Q99853 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXB1Q99853 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXB1Q99853 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FOXB1Q99853 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXB1Q99853 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXB1Q99853 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FOXB1Q99853 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FOXB1Q99853 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.1■□□□□ 0.33
FOXB1Q99853 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
FOXB1Q99853 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXB1Q99853 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
FOXB1Q99853 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXB1Q99853 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXB1Q99853 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
FOXB1Q99853 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXB1Q99853 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXB1Q99853 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FOXB1Q99853 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXB1Q99853 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.09■□□□□ 0.33
FOXB1Q99853 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXB1Q99853 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
FOXB1Q99853 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FOXB1Q99853 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
FOXB1Q99853 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXB1Q99853 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
FOXB1Q99853 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXB1Q99853 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FOXB1Q99853 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXB1Q99853 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXB1Q99853 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXB1Q99853 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
FOXB1Q99853 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
FOXB1Q99853 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
FOXB1Q99853 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
FOXB1Q99853 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
FOXB1Q99853 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
FOXB1Q99853 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.08■□□□□ 0.33
FOXB1Q99853 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
FOXB1Q99853 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.08■□□□□ 0.33
FOXB1Q99853 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.08■□□□□ 0.33
FOXB1Q99853 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXB1Q99853 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXB1Q99853 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXB1Q99853 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
FOXB1Q99853 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.08■□□□□ 0.32
FOXB1Q99853 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
FOXB1Q99853 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.08■□□□□ 0.32
FOXB1Q99853 GCSHP5-201ENST00000443090 522 ntBASIC17.08■□□□□ 0.32
FOXB1Q99853 AL158047.1-201ENST00000445918 881 ntBASIC17.08■□□□□ 0.32
FOXB1Q99853 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXB1Q99853 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.08■□□□□ 0.32
FOXB1Q99853 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.08■□□□□ 0.32
FOXB1Q99853 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
FOXB1Q99853 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.08■□□□□ 0.32
FOXB1Q99853 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.08■□□□□ 0.32
FOXB1Q99853 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.08■□□□□ 0.32
FOXB1Q99853 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.08■□□□□ 0.32
FOXB1Q99853 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.08■□□□□ 0.32
FOXB1Q99853 TMEM191A-211ENST00000637163 1067 ntBASIC17.08■□□□□ 0.32
FOXB1Q99853 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
FOXB1Q99853 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXB1Q99853 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXB1Q99853 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXB1Q99853 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.08■□□□□ 0.32
FOXB1Q99853 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXB1Q99853 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.08■□□□□ 0.32
FOXB1Q99853 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.08■□□□□ 0.32
FOXB1Q99853 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXB1Q99853 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXB1Q99853 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXB1Q99853 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FOXB1Q99853 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXB1Q99853 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FOXB1Q99853 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
FOXB1Q99853 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXB1Q99853 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXB1Q99853 ZNF815P-204ENST00000434898 1737 ntBASIC17.07■□□□□ 0.32
FOXB1Q99853 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
FOXB1Q99853 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
FOXB1Q99853 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.07■□□□□ 0.32
FOXB1Q99853 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXB1Q99853 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXB1Q99853 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
FOXB1Q99853 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXB1Q99853 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
FOXB1Q99853 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.07■□□□□ 0.32
FOXB1Q99853 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.07■□□□□ 0.32
FOXB1Q99853 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXB1Q99853 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
FOXB1Q99853 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXB1Q99853 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXB1Q99853 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms