Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.79■□□□□ 0.6
CDC6Q99741 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDC6Q99741 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC6Q99741 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.79■□□□□ 0.6
CDC6Q99741 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.79■□□□□ 0.6
CDC6Q99741 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDC6Q99741 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC6Q99741 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDC6Q99741 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC6Q99741 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CDC6Q99741 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CDC6Q99741 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CDC6Q99741 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDC6Q99741 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC6Q99741 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDC6Q99741 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CDC6Q99741 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDC6Q99741 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CDC6Q99741 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC6Q99741 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC6Q99741 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC6Q99741 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC6Q99741 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.78■□□□□ 0.6
CDC6Q99741 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.78■□□□□ 0.6
CDC6Q99741 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDC6Q99741 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.78■□□□□ 0.6
CDC6Q99741 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.78■□□□□ 0.6
CDC6Q99741 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.78■□□□□ 0.6
CDC6Q99741 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.78■□□□□ 0.6
CDC6Q99741 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CDC6Q99741 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.78■□□□□ 0.6
CDC6Q99741 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC6Q99741 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDC6Q99741 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC6Q99741 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.78■□□□□ 0.6
CDC6Q99741 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.78■□□□□ 0.6
CDC6Q99741 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC6Q99741 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC6Q99741 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDC6Q99741 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.77■□□□□ 0.6
CDC6Q99741 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CDC6Q99741 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.77■□□□□ 0.6
CDC6Q99741 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDC6Q99741 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.77■□□□□ 0.6
CDC6Q99741 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
CDC6Q99741 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDC6Q99741 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDC6Q99741 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CDC6Q99741 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDC6Q99741 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDC6Q99741 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.77■□□□□ 0.6
CDC6Q99741 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.77■□□□□ 0.6
CDC6Q99741 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.77■□□□□ 0.6
CDC6Q99741 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CDC6Q99741 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.77■□□□□ 0.6
CDC6Q99741 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDC6Q99741 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CDC6Q99741 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDC6Q99741 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDC6Q99741 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.77■□□□□ 0.59
CDC6Q99741 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDC6Q99741 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDC6Q99741 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.77■□□□□ 0.59
CDC6Q99741 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
CDC6Q99741 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
CDC6Q99741 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
CDC6Q99741 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC6Q99741 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC6Q99741 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDC6Q99741 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDC6Q99741 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.76■□□□□ 0.59
CDC6Q99741 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDC6Q99741 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC6Q99741 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDC6Q99741 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC6Q99741 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDC6Q99741 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC6Q99741 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.76■□□□□ 0.59
CDC6Q99741 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC6Q99741 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.76■□□□□ 0.59
CDC6Q99741 AP003041.3-201ENST00000527151 707 ntBASIC18.76■□□□□ 0.59
CDC6Q99741 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC6Q99741 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC6Q99741 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.76■□□□□ 0.59
CDC6Q99741 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC6Q99741 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC6Q99741 AC092720.2-201ENST00000602388 1665 ntBASIC18.76■□□□□ 0.59
CDC6Q99741 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CDC6Q99741 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDC6Q99741 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
CDC6Q99741 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CDC6Q99741 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CDC6Q99741 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC6Q99741 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.75■□□□□ 0.59
CDC6Q99741 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.75■□□□□ 0.59
CDC6Q99741 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC6Q99741 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC6Q99741 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC6Q99741 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.75■□□□□ 0.59
CDC6Q99741 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms