Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
CRAMP1Q96RY5 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC23.84■■□□□ 1.41
CRAMP1Q96RY5 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CRAMP1Q96RY5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.83■■□□□ 1.41
CRAMP1Q96RY5 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CRAMP1Q96RY5 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CRAMP1Q96RY5 IPPK-202ENST00000375522 882 ntTSL 3 BASIC23.83■■□□□ 1.41
CRAMP1Q96RY5 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CRAMP1Q96RY5 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CRAMP1Q96RY5 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CRAMP1Q96RY5 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC23.83■■□□□ 1.41
CRAMP1Q96RY5 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC23.83■■□□□ 1.41
CRAMP1Q96RY5 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC23.83■■□□□ 1.41
CRAMP1Q96RY5 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
CRAMP1Q96RY5 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC23.83■■□□□ 1.41
CRAMP1Q96RY5 HYMAI.1-201ENST00000620949 238 ntBASIC23.83■■□□□ 1.41
CRAMP1Q96RY5 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC23.83■■□□□ 1.41
CRAMP1Q96RY5 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
CRAMP1Q96RY5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
CRAMP1Q96RY5 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.4
CRAMP1Q96RY5 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
CRAMP1Q96RY5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.83■■□□□ 1.4
CRAMP1Q96RY5 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC23.83■■□□□ 1.4
CRAMP1Q96RY5 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CRAMP1Q96RY5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CRAMP1Q96RY5 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CRAMP1Q96RY5 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CRAMP1Q96RY5 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC23.82■■□□□ 1.4
CRAMP1Q96RY5 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC23.82■■□□□ 1.4
CRAMP1Q96RY5 LY6E-213ENST00000522528 606 ntTSL 3 BASIC23.82■■□□□ 1.4
CRAMP1Q96RY5 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC23.82■■□□□ 1.4
CRAMP1Q96RY5 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC23.82■■□□□ 1.4
CRAMP1Q96RY5 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.82■■□□□ 1.4
CRAMP1Q96RY5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CRAMP1Q96RY5 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
CRAMP1Q96RY5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CRAMP1Q96RY5 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CRAMP1Q96RY5 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
CRAMP1Q96RY5 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CRAMP1Q96RY5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CRAMP1Q96RY5 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.81■■□□□ 1.4
CRAMP1Q96RY5 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CRAMP1Q96RY5 LINC00565-201ENST00000562710 2331 ntBASIC23.81■■□□□ 1.4
CRAMP1Q96RY5 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CRAMP1Q96RY5 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CRAMP1Q96RY5 STARP1-201ENST00000397973 869 ntBASIC23.81■■□□□ 1.4
CRAMP1Q96RY5 AC112907.2-201ENST00000448639 330 ntBASIC23.81■■□□□ 1.4
CRAMP1Q96RY5 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC23.81■■□□□ 1.4
CRAMP1Q96RY5 VENTXP5-201ENST00000523979 775 ntBASIC23.81■■□□□ 1.4
CRAMP1Q96RY5 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC23.81■■□□□ 1.4
CRAMP1Q96RY5 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CRAMP1Q96RY5 AC069148.1-201ENST00000608741 768 ntBASIC23.81■■□□□ 1.4
CRAMP1Q96RY5 AC083849.1-201ENST00000615227 514 ntBASIC23.81■■□□□ 1.4
CRAMP1Q96RY5 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CRAMP1Q96RY5 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC23.81■■□□□ 1.4
CRAMP1Q96RY5 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CRAMP1Q96RY5 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CRAMP1Q96RY5 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC23.81■■□□□ 1.4
CRAMP1Q96RY5 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC23.8■■□□□ 1.4
CRAMP1Q96RY5 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC23.8■■□□□ 1.4
CRAMP1Q96RY5 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC23.8■■□□□ 1.4
CRAMP1Q96RY5 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CRAMP1Q96RY5 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CRAMP1Q96RY5 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CRAMP1Q96RY5 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC23.8■■□□□ 1.4
CRAMP1Q96RY5 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CRAMP1Q96RY5 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC23.8■■□□□ 1.4
CRAMP1Q96RY5 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
CRAMP1Q96RY5 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC23.8■■□□□ 1.4
CRAMP1Q96RY5 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC23.8■■□□□ 1.4
CRAMP1Q96RY5 ZNF444P1-201ENST00000559497 298 ntBASIC23.8■■□□□ 1.4
CRAMP1Q96RY5 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC23.8■■□□□ 1.4
CRAMP1Q96RY5 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC23.8■■□□□ 1.4
CRAMP1Q96RY5 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
CRAMP1Q96RY5 AC009237.14-201ENST00000609975 1594 ntBASIC23.8■■□□□ 1.4
CRAMP1Q96RY5 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CRAMP1Q96RY5 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CRAMP1Q96RY5 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CRAMP1Q96RY5 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CRAMP1Q96RY5 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CRAMP1Q96RY5 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC23.79■■□□□ 1.4
CRAMP1Q96RY5 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CRAMP1Q96RY5 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CRAMP1Q96RY5 AC020907.5-201ENST00000624372 1936 ntBASIC23.79■■□□□ 1.4
CRAMP1Q96RY5 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.79■■□□□ 1.4
CRAMP1Q96RY5 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CRAMP1Q96RY5 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CRAMP1Q96RY5 AL450487.1-201ENST00000426799 995 ntBASIC23.79■■□□□ 1.4
CRAMP1Q96RY5 HCG4P8-203ENST00000443049 980 ntBASIC23.79■■□□□ 1.4
CRAMP1Q96RY5 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CRAMP1Q96RY5 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC23.79■■□□□ 1.4
CRAMP1Q96RY5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CRAMP1Q96RY5 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.78■■□□□ 1.4
CRAMP1Q96RY5 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CRAMP1Q96RY5 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CRAMP1Q96RY5 TPM4P1-201ENST00000436100 807 ntBASIC23.78■■□□□ 1.4
CRAMP1Q96RY5 GCSHP2-201ENST00000560971 527 ntBASIC23.78■■□□□ 1.4
CRAMP1Q96RY5 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC23.78■■□□□ 1.4
CRAMP1Q96RY5 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC23.78■■□□□ 1.4
CRAMP1Q96RY5 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms