Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.34■□□□□ 0.53
COL21A1Q96P44 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
COL21A1Q96P44 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
COL21A1Q96P44 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
COL21A1Q96P44 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.33■□□□□ 0.53
COL21A1Q96P44 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL21A1Q96P44 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL21A1Q96P44 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.33■□□□□ 0.53
COL21A1Q96P44 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
COL21A1Q96P44 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
COL21A1Q96P44 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL21A1Q96P44 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
COL21A1Q96P44 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.33■□□□□ 0.53
COL21A1Q96P44 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL21A1Q96P44 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL21A1Q96P44 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL21A1Q96P44 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL21A1Q96P44 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
COL21A1Q96P44 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.33■□□□□ 0.52
COL21A1Q96P44 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL21A1Q96P44 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL21A1Q96P44 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
COL21A1Q96P44 ESRRAP1-201ENST00000400596 1257 ntBASIC18.33■□□□□ 0.52
COL21A1Q96P44 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL21A1Q96P44 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.33■□□□□ 0.52
COL21A1Q96P44 AC120498.8-201ENST00000614275 531 ntBASIC18.33■□□□□ 0.52
COL21A1Q96P44 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.33■□□□□ 0.52
COL21A1Q96P44 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL21A1Q96P44 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
COL21A1Q96P44 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
COL21A1Q96P44 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.33■□□□□ 0.52
COL21A1Q96P44 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL21A1Q96P44 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL21A1Q96P44 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL21A1Q96P44 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL21A1Q96P44 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
COL21A1Q96P44 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL21A1Q96P44 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL21A1Q96P44 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL21A1Q96P44 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
COL21A1Q96P44 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.32■□□□□ 0.52
COL21A1Q96P44 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.32■□□□□ 0.52
COL21A1Q96P44 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.32■□□□□ 0.52
COL21A1Q96P44 MIR4651-201ENST00000582622 73 ntBASIC18.32■□□□□ 0.52
COL21A1Q96P44 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL21A1Q96P44 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.32■□□□□ 0.52
COL21A1Q96P44 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL21A1Q96P44 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL21A1Q96P44 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.32■□□□□ 0.52
COL21A1Q96P44 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL21A1Q96P44 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
COL21A1Q96P44 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL21A1Q96P44 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.32■□□□□ 0.52
COL21A1Q96P44 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL21A1Q96P44 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.31■□□□□ 0.52
COL21A1Q96P44 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL21A1Q96P44 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL21A1Q96P44 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL21A1Q96P44 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL21A1Q96P44 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL21A1Q96P44 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL21A1Q96P44 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.31■□□□□ 0.52
COL21A1Q96P44 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
COL21A1Q96P44 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.31■□□□□ 0.52
COL21A1Q96P44 RPS2P52-201ENST00000469610 820 ntBASIC18.31■□□□□ 0.52
COL21A1Q96P44 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.31■□□□□ 0.52
COL21A1Q96P44 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.31■□□□□ 0.52
COL21A1Q96P44 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL21A1Q96P44 AC008403.3-201ENST00000598924 454 ntBASIC18.31■□□□□ 0.52
COL21A1Q96P44 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.31■□□□□ 0.52
COL21A1Q96P44 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL21A1Q96P44 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
COL21A1Q96P44 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
COL21A1Q96P44 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
COL21A1Q96P44 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL21A1Q96P44 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
COL21A1Q96P44 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL21A1Q96P44 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL21A1Q96P44 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.3■□□□□ 0.52
COL21A1Q96P44 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL21A1Q96P44 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
COL21A1Q96P44 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL21A1Q96P44 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.3■□□□□ 0.52
COL21A1Q96P44 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL21A1Q96P44 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.3■□□□□ 0.52
COL21A1Q96P44 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
COL21A1Q96P44 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
COL21A1Q96P44 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.3■□□□□ 0.52
COL21A1Q96P44 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.3■□□□□ 0.52
COL21A1Q96P44 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL21A1Q96P44 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
COL21A1Q96P44 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL21A1Q96P44 POM121L13P-201ENST00000422362 380 ntBASIC18.3■□□□□ 0.52
COL21A1Q96P44 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.3■□□□□ 0.52
COL21A1Q96P44 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL21A1Q96P44 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.3■□□□□ 0.52
COL21A1Q96P44 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.3■□□□□ 0.52
COL21A1Q96P44 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.3■□□□□ 0.52
COL21A1Q96P44 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.3■□□□□ 0.52
COL21A1Q96P44 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms