Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.7
NBPF4Q96M43 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
NBPF4Q96M43 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
NBPF4Q96M43 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.69
NBPF4Q96M43 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC25.64■■□□□ 1.69
NBPF4Q96M43 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
NBPF4Q96M43 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC25.63■■□□□ 1.69
NBPF4Q96M43 KRT8P11-201ENST00000409686 1436 ntBASIC25.63■■□□□ 1.69
NBPF4Q96M43 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NBPF4Q96M43 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
NBPF4Q96M43 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
NBPF4Q96M43 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
NBPF4Q96M43 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NBPF4Q96M43 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NBPF4Q96M43 AC092647.4-201ENST00000457211 535 ntBASIC25.63■■□□□ 1.69
NBPF4Q96M43 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
NBPF4Q96M43 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC25.63■■□□□ 1.69
NBPF4Q96M43 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC25.63■■□□□ 1.69
NBPF4Q96M43 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC25.63■■□□□ 1.69
NBPF4Q96M43 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
NBPF4Q96M43 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
NBPF4Q96M43 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
NBPF4Q96M43 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC25.63■■□□□ 1.69
NBPF4Q96M43 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NBPF4Q96M43 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC25.63■■□□□ 1.69
NBPF4Q96M43 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC25.63■■□□□ 1.69
NBPF4Q96M43 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NBPF4Q96M43 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NBPF4Q96M43 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC25.62■■□□□ 1.69
NBPF4Q96M43 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC25.62■■□□□ 1.69
NBPF4Q96M43 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
NBPF4Q96M43 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NBPF4Q96M43 BET1L-202ENST00000332865 533 ntTSL 5 BASIC25.62■■□□□ 1.69
NBPF4Q96M43 ANKRD20A18P-201ENST00000359341 492 ntBASIC25.62■■□□□ 1.69
NBPF4Q96M43 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NBPF4Q96M43 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
NBPF4Q96M43 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC25.62■■□□□ 1.69
NBPF4Q96M43 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NBPF4Q96M43 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
NBPF4Q96M43 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC25.62■■□□□ 1.69
NBPF4Q96M43 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC25.62■■□□□ 1.69
NBPF4Q96M43 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NBPF4Q96M43 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
NBPF4Q96M43 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
NBPF4Q96M43 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NBPF4Q96M43 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC25.61■■□□□ 1.69
NBPF4Q96M43 KRT18P38-201ENST00000449496 1282 ntBASIC25.61■■□□□ 1.69
NBPF4Q96M43 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
NBPF4Q96M43 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
NBPF4Q96M43 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
NBPF4Q96M43 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
NBPF4Q96M43 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC25.61■■□□□ 1.69
NBPF4Q96M43 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC25.61■■□□□ 1.69
NBPF4Q96M43 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC25.61■■□□□ 1.69
NBPF4Q96M43 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
NBPF4Q96M43 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
NBPF4Q96M43 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NBPF4Q96M43 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC25.61■■□□□ 1.69
NBPF4Q96M43 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC25.61■■□□□ 1.69
NBPF4Q96M43 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC25.61■■□□□ 1.69
NBPF4Q96M43 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
NBPF4Q96M43 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
NBPF4Q96M43 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
NBPF4Q96M43 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC25.6■■□□□ 1.69
NBPF4Q96M43 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NBPF4Q96M43 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NBPF4Q96M43 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
NBPF4Q96M43 AL359075.1-203ENST00000462729 1002 ntBASIC25.6■■□□□ 1.69
NBPF4Q96M43 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC25.6■■□□□ 1.69
NBPF4Q96M43 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC25.6■■□□□ 1.69
NBPF4Q96M43 ETFA-216ENST00000560726 942 ntTSL 3 BASIC25.6■■□□□ 1.69
NBPF4Q96M43 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC25.6■■□□□ 1.69
NBPF4Q96M43 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC25.6■■□□□ 1.69
NBPF4Q96M43 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC25.6■■□□□ 1.69
NBPF4Q96M43 AP000550.4-202ENST00000639755 178 ntBASIC25.6■■□□□ 1.69
NBPF4Q96M43 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NBPF4Q96M43 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NBPF4Q96M43 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC25.6■■□□□ 1.69
NBPF4Q96M43 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
NBPF4Q96M43 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
NBPF4Q96M43 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC25.59■■□□□ 1.69
NBPF4Q96M43 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC25.59■■□□□ 1.69
NBPF4Q96M43 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
NBPF4Q96M43 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
NBPF4Q96M43 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC25.59■■□□□ 1.69
NBPF4Q96M43 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC25.59■■□□□ 1.69
NBPF4Q96M43 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC25.59■■□□□ 1.69
NBPF4Q96M43 METTL23-204ENST00000586752 904 ntTSL 2 BASIC25.59■■□□□ 1.69
NBPF4Q96M43 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
NBPF4Q96M43 AL121956.5-201ENST00000625261 221 ntBASIC25.59■■□□□ 1.69
NBPF4Q96M43 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC25.59■■□□□ 1.69
NBPF4Q96M43 AL031432.5-201ENST00000641059 760 ntBASIC25.59■■□□□ 1.69
NBPF4Q96M43 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
NBPF4Q96M43 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
NBPF4Q96M43 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
NBPF4Q96M43 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC25.59■■□□□ 1.69
NBPF4Q96M43 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC25.59■■□□□ 1.69
NBPF4Q96M43 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
NBPF4Q96M43 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC25.58■■□□□ 1.69
NBPF4Q96M43 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC25.58■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms