Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CALR3Q96L12 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CALR3Q96L12 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.52■□□□□ 0.88
CALR3Q96L12 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.52■□□□□ 0.88
CALR3Q96L12 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.52■□□□□ 0.88
CALR3Q96L12 AC105036.2-201ENST00000569468 176 ntBASIC20.52■□□□□ 0.88
CALR3Q96L12 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.52■□□□□ 0.88
CALR3Q96L12 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.52■□□□□ 0.88
CALR3Q96L12 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CALR3Q96L12 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CALR3Q96L12 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CALR3Q96L12 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CALR3Q96L12 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.52■□□□□ 0.88
CALR3Q96L12 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CALR3Q96L12 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CALR3Q96L12 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
CALR3Q96L12 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CALR3Q96L12 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CALR3Q96L12 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CALR3Q96L12 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CALR3Q96L12 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CALR3Q96L12 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CALR3Q96L12 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CALR3Q96L12 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.51■□□□□ 0.87
CALR3Q96L12 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CALR3Q96L12 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CALR3Q96L12 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CALR3Q96L12 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.51■□□□□ 0.87
CALR3Q96L12 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CALR3Q96L12 BX276092.2-201ENST00000417668 665 ntBASIC20.51■□□□□ 0.87
CALR3Q96L12 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.51■□□□□ 0.87
CALR3Q96L12 AC022517.1-201ENST00000592429 346 ntBASIC20.51■□□□□ 0.87
CALR3Q96L12 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.51■□□□□ 0.87
CALR3Q96L12 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CALR3Q96L12 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CALR3Q96L12 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CALR3Q96L12 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.51■□□□□ 0.87
CALR3Q96L12 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.51■□□□□ 0.87
CALR3Q96L12 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.51■□□□□ 0.87
CALR3Q96L12 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.5■□□□□ 0.87
CALR3Q96L12 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CALR3Q96L12 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CALR3Q96L12 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CALR3Q96L12 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.5■□□□□ 0.87
CALR3Q96L12 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.5■□□□□ 0.87
CALR3Q96L12 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CALR3Q96L12 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CALR3Q96L12 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CALR3Q96L12 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CALR3Q96L12 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.5■□□□□ 0.87
CALR3Q96L12 AC004911.1-201ENST00000416316 871 ntBASIC20.5■□□□□ 0.87
CALR3Q96L12 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.5■□□□□ 0.87
CALR3Q96L12 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CALR3Q96L12 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.5■□□□□ 0.87
CALR3Q96L12 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.5■□□□□ 0.87
CALR3Q96L12 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
CALR3Q96L12 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.5■□□□□ 0.87
CALR3Q96L12 AL161938.1-201ENST00000569833 2180 ntBASIC20.5■□□□□ 0.87
CALR3Q96L12 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CALR3Q96L12 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CALR3Q96L12 TEX21P-204ENST00000641479 1693 ntBASIC20.5■□□□□ 0.87
CALR3Q96L12 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CALR3Q96L12 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CALR3Q96L12 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.5■□□□□ 0.87
CALR3Q96L12 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CALR3Q96L12 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CALR3Q96L12 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CALR3Q96L12 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CALR3Q96L12 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CALR3Q96L12 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CALR3Q96L12 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CALR3Q96L12 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.49■□□□□ 0.87
CALR3Q96L12 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
CALR3Q96L12 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CALR3Q96L12 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.49■□□□□ 0.87
CALR3Q96L12 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.49■□□□□ 0.87
CALR3Q96L12 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CALR3Q96L12 YBX1P10-201ENST00000444752 975 ntBASIC20.49■□□□□ 0.87
CALR3Q96L12 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.49■□□□□ 0.87
CALR3Q96L12 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
CALR3Q96L12 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.49■□□□□ 0.87
CALR3Q96L12 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.49■□□□□ 0.87
CALR3Q96L12 AC080038.1-201ENST00000611274 1154 ntBASIC20.49■□□□□ 0.87
CALR3Q96L12 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CALR3Q96L12 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
CALR3Q96L12 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
CALR3Q96L12 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CALR3Q96L12 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CALR3Q96L12 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CALR3Q96L12 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CALR3Q96L12 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CALR3Q96L12 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.49■□□□□ 0.87
CALR3Q96L12 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CALR3Q96L12 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CALR3Q96L12 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CALR3Q96L12 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CALR3Q96L12 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CALR3Q96L12 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.48■□□□□ 0.87
CALR3Q96L12 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CALR3Q96L12 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms