Protein–RNA interactions for Protein: Q96KK3

KCNS1, Potassium voltage-gated channel subfamily S member 1, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS1Q96KK3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 CROCCP3-202ENST00000420820 1947 ntBASIC14.78□□□□□ -0.04
KCNS1Q96KK3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 AC019069.1-201ENST00000610008 1333 ntBASIC14.78□□□□□ -0.04
KCNS1Q96KK3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
KCNS1Q96KK3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC14.77□□□□□ -0.04
KCNS1Q96KK3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
KCNS1Q96KK3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
KCNS1Q96KK3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC14.77□□□□□ -0.04
KCNS1Q96KK3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC14.77□□□□□ -0.04
KCNS1Q96KK3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
KCNS1Q96KK3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
KCNS1Q96KK3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
KCNS1Q96KK3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
KCNS1Q96KK3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
KCNS1Q96KK3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
KCNS1Q96KK3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
KCNS1Q96KK3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
KCNS1Q96KK3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
KCNS1Q96KK3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
KCNS1Q96KK3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC14.77□□□□□ -0.05
KCNS1Q96KK3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
KCNS1Q96KK3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
KCNS1Q96KK3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
KCNS1Q96KK3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
KCNS1Q96KK3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
KCNS1Q96KK3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
KCNS1Q96KK3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.77□□□□□ -0.05
KCNS1Q96KK3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
KCNS1Q96KK3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KCNS1Q96KK3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
KCNS1Q96KK3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.77□□□□□ -0.05
KCNS1Q96KK3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KCNS1Q96KK3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
KCNS1Q96KK3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KCNS1Q96KK3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KCNS1Q96KK3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.77□□□□□ -0.05
KCNS1Q96KK3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
KCNS1Q96KK3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KCNS1Q96KK3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KCNS1Q96KK3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KCNS1Q96KK3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
KCNS1Q96KK3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
KCNS1Q96KK3 AC004854.2-201ENST00000608450 1441 ntBASIC14.76□□□□□ -0.05
KCNS1Q96KK3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KCNS1Q96KK3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KCNS1Q96KK3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KCNS1Q96KK3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
KCNS1Q96KK3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KCNS1Q96KK3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KCNS1Q96KK3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
KCNS1Q96KK3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KCNS1Q96KK3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.76□□□□□ -0.05
KCNS1Q96KK3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC14.76□□□□□ -0.05
KCNS1Q96KK3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KCNS1Q96KK3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KCNS1Q96KK3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC14.76□□□□□ -0.05
KCNS1Q96KK3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC14.76□□□□□ -0.05
KCNS1Q96KK3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC14.76□□□□□ -0.05
KCNS1Q96KK3 SP2-202ENST00000613139 908 ntTSL 5 BASIC14.76□□□□□ -0.05
KCNS1Q96KK3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC14.76□□□□□ -0.05
KCNS1Q96KK3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms