Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.47■□□□□ 0.87
SMARCD1Q96GM5 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SMARCD1Q96GM5 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SMARCD1Q96GM5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
SMARCD1Q96GM5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SMARCD1Q96GM5 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCD1Q96GM5 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCD1Q96GM5 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCD1Q96GM5 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCD1Q96GM5 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.46■□□□□ 0.87
SMARCD1Q96GM5 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCD1Q96GM5 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCD1Q96GM5 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.46■□□□□ 0.87
SMARCD1Q96GM5 MESTP1-201ENST00000404287 994 ntBASIC20.46■□□□□ 0.87
SMARCD1Q96GM5 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.46■□□□□ 0.87
SMARCD1Q96GM5 TSPY15P-201ENST00000457163 923 ntBASIC20.46■□□□□ 0.87
SMARCD1Q96GM5 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.46■□□□□ 0.87
SMARCD1Q96GM5 Z85996.1-201ENST00000494644 937 ntBASIC20.46■□□□□ 0.87
SMARCD1Q96GM5 BX088651.1-201ENST00000540551 451 ntBASIC20.46■□□□□ 0.87
SMARCD1Q96GM5 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.46■□□□□ 0.87
SMARCD1Q96GM5 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.46■□□□□ 0.87
SMARCD1Q96GM5 LINC01465-201ENST00000408887 1940 ntBASIC20.46■□□□□ 0.87
SMARCD1Q96GM5 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCD1Q96GM5 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCD1Q96GM5 RCC2P6-201ENST00000526625 1557 ntBASIC20.46■□□□□ 0.87
SMARCD1Q96GM5 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.46■□□□□ 0.87
SMARCD1Q96GM5 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCD1Q96GM5 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCD1Q96GM5 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCD1Q96GM5 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.45■□□□□ 0.87
SMARCD1Q96GM5 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SMARCD1Q96GM5 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMARCD1Q96GM5 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SMARCD1Q96GM5 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMARCD1Q96GM5 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.45■□□□□ 0.86
SMARCD1Q96GM5 UNC93B2-201ENST00000285383 730 ntBASIC20.45■□□□□ 0.86
SMARCD1Q96GM5 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SMARCD1Q96GM5 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.45■□□□□ 0.86
SMARCD1Q96GM5 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.45■□□□□ 0.86
SMARCD1Q96GM5 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.45■□□□□ 0.86
SMARCD1Q96GM5 AC073912.3-201ENST00000624414 853 ntBASIC20.45■□□□□ 0.86
SMARCD1Q96GM5 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.45■□□□□ 0.86
SMARCD1Q96GM5 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMARCD1Q96GM5 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMARCD1Q96GM5 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.45■□□□□ 0.86
SMARCD1Q96GM5 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SMARCD1Q96GM5 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMARCD1Q96GM5 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.45■□□□□ 0.86
SMARCD1Q96GM5 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMARCD1Q96GM5 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMARCD1Q96GM5 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.45■□□□□ 0.86
SMARCD1Q96GM5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.45■□□□□ 0.86
SMARCD1Q96GM5 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.45■□□□□ 0.86
SMARCD1Q96GM5 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.44■□□□□ 0.86
SMARCD1Q96GM5 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SMARCD1Q96GM5 AC125437.2-201ENST00000625180 2167 ntBASIC20.44■□□□□ 0.86
SMARCD1Q96GM5 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.44■□□□□ 0.86
SMARCD1Q96GM5 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCD1Q96GM5 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
SMARCD1Q96GM5 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SMARCD1Q96GM5 AC011506.1-201ENST00000474329 610 ntBASIC20.44■□□□□ 0.86
SMARCD1Q96GM5 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.44■□□□□ 0.86
SMARCD1Q96GM5 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCD1Q96GM5 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.44■□□□□ 0.86
SMARCD1Q96GM5 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCD1Q96GM5 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCD1Q96GM5 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.44■□□□□ 0.86
SMARCD1Q96GM5 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.44■□□□□ 0.86
SMARCD1Q96GM5 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCD1Q96GM5 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCD1Q96GM5 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCD1Q96GM5 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SMARCD1Q96GM5 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SMARCD1Q96GM5 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.43■□□□□ 0.86
SMARCD1Q96GM5 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCD1Q96GM5 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCD1Q96GM5 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCD1Q96GM5 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCD1Q96GM5 AC004951.3-201ENST00000418645 1148 ntBASIC20.43■□□□□ 0.86
SMARCD1Q96GM5 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
SMARCD1Q96GM5 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.43■□□□□ 0.86
SMARCD1Q96GM5 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.43■□□□□ 0.86
SMARCD1Q96GM5 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCD1Q96GM5 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.43■□□□□ 0.86
SMARCD1Q96GM5 DGCR10-201ENST00000609839 495 ntBASIC20.43■□□□□ 0.86
SMARCD1Q96GM5 AC011298.2-201ENST00000617989 482 ntBASIC20.43■□□□□ 0.86
SMARCD1Q96GM5 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCD1Q96GM5 ZNF815P-204ENST00000434898 1737 ntBASIC20.43■□□□□ 0.86
SMARCD1Q96GM5 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCD1Q96GM5 TREX1-205ENST00000625293 1783 ntBASIC20.43■□□□□ 0.86
SMARCD1Q96GM5 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCD1Q96GM5 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCD1Q96GM5 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.43■□□□□ 0.86
SMARCD1Q96GM5 AC073130.3-201ENST00000624389 2278 ntBASIC20.43■□□□□ 0.86
SMARCD1Q96GM5 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCD1Q96GM5 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCD1Q96GM5 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCD1Q96GM5 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.43■□□□□ 0.86
SMARCD1Q96GM5 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCD1Q96GM5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms