Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 LINC01465-201ENST00000408887 1940 ntBASIC19.47■□□□□ 0.71
ECHDC3Q96DC8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ECHDC3Q96DC8 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ECHDC3Q96DC8 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ECHDC3Q96DC8 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.47■□□□□ 0.71
ECHDC3Q96DC8 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.47■□□□□ 0.71
ECHDC3Q96DC8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.47■□□□□ 0.71
ECHDC3Q96DC8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ECHDC3Q96DC8 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.47■□□□□ 0.71
ECHDC3Q96DC8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
ECHDC3Q96DC8 AL355075.4-201ENST00000554988 638 ntBASIC19.47■□□□□ 0.71
ECHDC3Q96DC8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ECHDC3Q96DC8 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.47■□□□□ 0.71
ECHDC3Q96DC8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.47■□□□□ 0.71
ECHDC3Q96DC8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
ECHDC3Q96DC8 ZNF815P-204ENST00000434898 1737 ntBASIC19.47■□□□□ 0.71
ECHDC3Q96DC8 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.47■□□□□ 0.71
ECHDC3Q96DC8 AC104417.2-201ENST00000562989 1793 ntBASIC19.47■□□□□ 0.71
ECHDC3Q96DC8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
ECHDC3Q96DC8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ECHDC3Q96DC8 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
ECHDC3Q96DC8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ECHDC3Q96DC8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.46■□□□□ 0.71
ECHDC3Q96DC8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ECHDC3Q96DC8 B3GAT3P1-201ENST00000471720 806 ntBASIC19.46■□□□□ 0.71
ECHDC3Q96DC8 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.46■□□□□ 0.71
ECHDC3Q96DC8 MIR6786-201ENST00000616843 113 ntBASIC19.46■□□□□ 0.71
ECHDC3Q96DC8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.46■□□□□ 0.71
ECHDC3Q96DC8 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.46■□□□□ 0.71
ECHDC3Q96DC8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.46■□□□□ 0.71
ECHDC3Q96DC8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ECHDC3Q96DC8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.46■□□□□ 0.71
ECHDC3Q96DC8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ECHDC3Q96DC8 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ECHDC3Q96DC8 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.46■□□□□ 0.71
ECHDC3Q96DC8 FSCN1P1-201ENST00000568912 1481 ntBASIC19.46■□□□□ 0.71
ECHDC3Q96DC8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ECHDC3Q96DC8 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ECHDC3Q96DC8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ECHDC3Q96DC8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
ECHDC3Q96DC8 RCC2P6-201ENST00000526625 1557 ntBASIC19.45■□□□□ 0.7
ECHDC3Q96DC8 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ECHDC3Q96DC8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ECHDC3Q96DC8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ECHDC3Q96DC8 TSPY15P-201ENST00000457163 923 ntBASIC19.45■□□□□ 0.7
ECHDC3Q96DC8 AC011506.1-201ENST00000474329 610 ntBASIC19.45■□□□□ 0.7
ECHDC3Q96DC8 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.45■□□□□ 0.7
ECHDC3Q96DC8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ECHDC3Q96DC8 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
ECHDC3Q96DC8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.45■□□□□ 0.7
ECHDC3Q96DC8 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.45■□□□□ 0.7
ECHDC3Q96DC8 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.45■□□□□ 0.7
ECHDC3Q96DC8 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.45■□□□□ 0.7
ECHDC3Q96DC8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ECHDC3Q96DC8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ECHDC3Q96DC8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ECHDC3Q96DC8 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ECHDC3Q96DC8 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ECHDC3Q96DC8 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ECHDC3Q96DC8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ECHDC3Q96DC8 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
ECHDC3Q96DC8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ECHDC3Q96DC8 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ECHDC3Q96DC8 AFG3L1P-217ENST00000557444 2447 ntBASIC19.44■□□□□ 0.7
ECHDC3Q96DC8 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ECHDC3Q96DC8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ECHDC3Q96DC8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ECHDC3Q96DC8 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.44■□□□□ 0.7
ECHDC3Q96DC8 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.44■□□□□ 0.7
ECHDC3Q96DC8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.44■□□□□ 0.7
ECHDC3Q96DC8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.44■□□□□ 0.7
ECHDC3Q96DC8 AC130371.2-201ENST00000619443 611 ntBASIC19.44■□□□□ 0.7
ECHDC3Q96DC8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ECHDC3Q96DC8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ECHDC3Q96DC8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ECHDC3Q96DC8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
ECHDC3Q96DC8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.44■□□□□ 0.7
ECHDC3Q96DC8 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
ECHDC3Q96DC8 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.43■□□□□ 0.7
ECHDC3Q96DC8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ECHDC3Q96DC8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ECHDC3Q96DC8 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ECHDC3Q96DC8 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.43■□□□□ 0.7
ECHDC3Q96DC8 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.43■□□□□ 0.7
ECHDC3Q96DC8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ECHDC3Q96DC8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ECHDC3Q96DC8 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ECHDC3Q96DC8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ECHDC3Q96DC8 KRT8P41-201ENST00000533985 1514 ntBASIC19.43■□□□□ 0.7
ECHDC3Q96DC8 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ECHDC3Q96DC8 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.43■□□□□ 0.7
ECHDC3Q96DC8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ECHDC3Q96DC8 RBM17P1-201ENST00000453646 1190 ntBASIC19.43■□□□□ 0.7
ECHDC3Q96DC8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.43■□□□□ 0.7
ECHDC3Q96DC8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.43■□□□□ 0.7
ECHDC3Q96DC8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ECHDC3Q96DC8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
ECHDC3Q96DC8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ECHDC3Q96DC8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.43■□□□□ 0.7
ECHDC3Q96DC8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms