Protein–RNA interactions for Protein: Q96A83

COL26A1, Collagen alpha-1(XXVI) chain, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL26A1Q96A83 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.76■□□□□ 0.59
COL26A1Q96A83 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.76■□□□□ 0.59
COL26A1Q96A83 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.76■□□□□ 0.59
COL26A1Q96A83 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.76■□□□□ 0.59
COL26A1Q96A83 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL26A1Q96A83 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL26A1Q96A83 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.76■□□□□ 0.59
COL26A1Q96A83 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.76■□□□□ 0.59
COL26A1Q96A83 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL26A1Q96A83 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
COL26A1Q96A83 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
COL26A1Q96A83 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
COL26A1Q96A83 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL26A1Q96A83 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL26A1Q96A83 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL26A1Q96A83 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL26A1Q96A83 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL26A1Q96A83 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL26A1Q96A83 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.75■□□□□ 0.59
COL26A1Q96A83 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.75■□□□□ 0.59
COL26A1Q96A83 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL26A1Q96A83 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.75■□□□□ 0.59
COL26A1Q96A83 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.75■□□□□ 0.59
COL26A1Q96A83 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL26A1Q96A83 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL26A1Q96A83 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL26A1Q96A83 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.75■□□□□ 0.59
COL26A1Q96A83 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.75■□□□□ 0.59
COL26A1Q96A83 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL26A1Q96A83 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL26A1Q96A83 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
COL26A1Q96A83 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL26A1Q96A83 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL26A1Q96A83 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL26A1Q96A83 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
COL26A1Q96A83 TCF3P1-201ENST00000423021 1937 ntBASIC18.74■□□□□ 0.59
COL26A1Q96A83 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.74■□□□□ 0.59
COL26A1Q96A83 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL26A1Q96A83 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL26A1Q96A83 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
COL26A1Q96A83 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL26A1Q96A83 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL26A1Q96A83 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL26A1Q96A83 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL26A1Q96A83 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL26A1Q96A83 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL26A1Q96A83 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL26A1Q96A83 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.74■□□□□ 0.59
COL26A1Q96A83 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
COL26A1Q96A83 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL26A1Q96A83 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
COL26A1Q96A83 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL26A1Q96A83 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.74■□□□□ 0.59
COL26A1Q96A83 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL26A1Q96A83 TSPY15P-201ENST00000457163 923 ntBASIC18.74■□□□□ 0.59
COL26A1Q96A83 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL26A1Q96A83 AFG3L1P-217ENST00000557444 2447 ntBASIC18.74■□□□□ 0.59
COL26A1Q96A83 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL26A1Q96A83 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL26A1Q96A83 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL26A1Q96A83 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL26A1Q96A83 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL26A1Q96A83 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.74■□□□□ 0.59
COL26A1Q96A83 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL26A1Q96A83 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL26A1Q96A83 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL26A1Q96A83 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.73■□□□□ 0.59
COL26A1Q96A83 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL26A1Q96A83 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL26A1Q96A83 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL26A1Q96A83 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.73■□□□□ 0.59
COL26A1Q96A83 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL26A1Q96A83 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL26A1Q96A83 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
COL26A1Q96A83 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
COL26A1Q96A83 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
COL26A1Q96A83 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.73■□□□□ 0.59
COL26A1Q96A83 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL26A1Q96A83 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.73■□□□□ 0.59
COL26A1Q96A83 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL26A1Q96A83 AC004264.1-201ENST00000608354 794 ntBASIC18.73■□□□□ 0.59
COL26A1Q96A83 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
COL26A1Q96A83 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL26A1Q96A83 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.73■□□□□ 0.59
COL26A1Q96A83 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL26A1Q96A83 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL26A1Q96A83 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
COL26A1Q96A83 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
COL26A1Q96A83 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL26A1Q96A83 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
COL26A1Q96A83 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL26A1Q96A83 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.73■□□□□ 0.59
COL26A1Q96A83 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL26A1Q96A83 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
COL26A1Q96A83 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL26A1Q96A83 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL26A1Q96A83 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
COL26A1Q96A83 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL26A1Q96A83 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL26A1Q96A83 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms