Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC44A1Q8WWI5 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SLC44A1Q8WWI5 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC44A1Q8WWI5 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC44A1Q8WWI5 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC44A1Q8WWI5 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC44A1Q8WWI5 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
SLC44A1Q8WWI5 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC44A1Q8WWI5 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.46■□□□□ 0.71
SLC44A1Q8WWI5 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.46■□□□□ 0.71
SLC44A1Q8WWI5 AC073210.2-201ENST00000430369 194 ntBASIC19.46■□□□□ 0.71
SLC44A1Q8WWI5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
SLC44A1Q8WWI5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.46■□□□□ 0.71
SLC44A1Q8WWI5 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC44A1Q8WWI5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC44A1Q8WWI5 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC44A1Q8WWI5 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC44A1Q8WWI5 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SLC44A1Q8WWI5 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SLC44A1Q8WWI5 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC44A1Q8WWI5 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC44A1Q8WWI5 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC44A1Q8WWI5 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.45■□□□□ 0.7
SLC44A1Q8WWI5 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.45■□□□□ 0.7
SLC44A1Q8WWI5 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC44A1Q8WWI5 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC44A1Q8WWI5 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SLC44A1Q8WWI5 AC133552.2-202ENST00000575694 574 ntBASIC19.45■□□□□ 0.7
SLC44A1Q8WWI5 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC44A1Q8WWI5 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC44A1Q8WWI5 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC44A1Q8WWI5 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC44A1Q8WWI5 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC44A1Q8WWI5 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SLC44A1Q8WWI5 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SLC44A1Q8WWI5 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.45■□□□□ 0.7
SLC44A1Q8WWI5 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SLC44A1Q8WWI5 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC44A1Q8WWI5 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
SLC44A1Q8WWI5 AL031598.1-201ENST00000561511 1773 ntBASIC19.44■□□□□ 0.7
SLC44A1Q8WWI5 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.44■□□□□ 0.7
SLC44A1Q8WWI5 AC104581.1-202ENST00000635932 2618 ntBASIC19.44■□□□□ 0.7
SLC44A1Q8WWI5 AC009113.1-201ENST00000570267 2443 ntBASIC19.44■□□□□ 0.7
SLC44A1Q8WWI5 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC44A1Q8WWI5 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC44A1Q8WWI5 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC44A1Q8WWI5 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC44A1Q8WWI5 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.44■□□□□ 0.7
SLC44A1Q8WWI5 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC44A1Q8WWI5 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
SLC44A1Q8WWI5 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC44A1Q8WWI5 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC44A1Q8WWI5 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC44A1Q8WWI5 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC44A1Q8WWI5 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC44A1Q8WWI5 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC44A1Q8WWI5 AC093525.10-201ENST00000625130 1569 ntBASIC19.44■□□□□ 0.7
SLC44A1Q8WWI5 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.44■□□□□ 0.7
SLC44A1Q8WWI5 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC44A1Q8WWI5 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.44■□□□□ 0.7
SLC44A1Q8WWI5 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SLC44A1Q8WWI5 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC44A1Q8WWI5 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.43■□□□□ 0.7
SLC44A1Q8WWI5 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC44A1Q8WWI5 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC44A1Q8WWI5 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC44A1Q8WWI5 AC104417.2-201ENST00000562989 1793 ntBASIC19.43■□□□□ 0.7
SLC44A1Q8WWI5 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC44A1Q8WWI5 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.43■□□□□ 0.7
SLC44A1Q8WWI5 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC44A1Q8WWI5 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC44A1Q8WWI5 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC44A1Q8WWI5 AC005829.2-201ENST00000571422 1056 ntBASIC19.43■□□□□ 0.7
SLC44A1Q8WWI5 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC44A1Q8WWI5 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC44A1Q8WWI5 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC44A1Q8WWI5 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC44A1Q8WWI5 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC44A1Q8WWI5 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC44A1Q8WWI5 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.43■□□□□ 0.7
SLC44A1Q8WWI5 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC44A1Q8WWI5 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC44A1Q8WWI5 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC44A1Q8WWI5 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC44A1Q8WWI5 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SLC44A1Q8WWI5 FP475955.4-201ENST00000623131 1990 ntBASIC19.43■□□□□ 0.7
SLC44A1Q8WWI5 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC44A1Q8WWI5 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC44A1Q8WWI5 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SLC44A1Q8WWI5 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC44A1Q8WWI5 SDHAP1-207ENST00000440850 2000 ntBASIC19.42■□□□□ 0.7
SLC44A1Q8WWI5 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC44A1Q8WWI5 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.42■□□□□ 0.7
SLC44A1Q8WWI5 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC44A1Q8WWI5 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
SLC44A1Q8WWI5 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.42■□□□□ 0.7
SLC44A1Q8WWI5 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC44A1Q8WWI5 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC44A1Q8WWI5 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC44A1Q8WWI5 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms