Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF138Q8WVD3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RNF138Q8WVD3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RNF138Q8WVD3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RNF138Q8WVD3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF138Q8WVD3 AC004951.3-201ENST00000418645 1148 ntBASIC17.61■□□□□ 0.41
RNF138Q8WVD3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.61■□□□□ 0.41
RNF138Q8WVD3 AC091390.4-202ENST00000476426 537 ntBASIC17.61■□□□□ 0.41
RNF138Q8WVD3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF138Q8WVD3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF138Q8WVD3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF138Q8WVD3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF138Q8WVD3 DGCR10-201ENST00000609839 495 ntBASIC17.61■□□□□ 0.41
RNF138Q8WVD3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF138Q8WVD3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF138Q8WVD3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF138Q8WVD3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF138Q8WVD3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
RNF138Q8WVD3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RNF138Q8WVD3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF138Q8WVD3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RNF138Q8WVD3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF138Q8WVD3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF138Q8WVD3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF138Q8WVD3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF138Q8WVD3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF138Q8WVD3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.6■□□□□ 0.41
RNF138Q8WVD3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
RNF138Q8WVD3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF138Q8WVD3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF138Q8WVD3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF138Q8WVD3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF138Q8WVD3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF138Q8WVD3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF138Q8WVD3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RNF138Q8WVD3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.6■□□□□ 0.41
RNF138Q8WVD3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.6■□□□□ 0.41
RNF138Q8WVD3 KRT17P2-201ENST00000300992 1314 ntBASIC17.6■□□□□ 0.41
RNF138Q8WVD3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.6■□□□□ 0.41
RNF138Q8WVD3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF138Q8WVD3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF138Q8WVD3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF138Q8WVD3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RNF138Q8WVD3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF138Q8WVD3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF138Q8WVD3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RNF138Q8WVD3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.6■□□□□ 0.41
RNF138Q8WVD3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF138Q8WVD3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RNF138Q8WVD3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF138Q8WVD3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF138Q8WVD3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF138Q8WVD3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RNF138Q8WVD3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF138Q8WVD3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF138Q8WVD3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.59■□□□□ 0.41
RNF138Q8WVD3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF138Q8WVD3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF138Q8WVD3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF138Q8WVD3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
RNF138Q8WVD3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF138Q8WVD3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
RNF138Q8WVD3 AL355355.2-201ENST00000442321 338 ntBASIC17.59■□□□□ 0.41
RNF138Q8WVD3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.59■□□□□ 0.41
RNF138Q8WVD3 AP000692.2-201ENST00000608391 879 ntBASIC17.59■□□□□ 0.41
RNF138Q8WVD3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RNF138Q8WVD3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF138Q8WVD3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.59■□□□□ 0.41
RNF138Q8WVD3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF138Q8WVD3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF138Q8WVD3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF138Q8WVD3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF138Q8WVD3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF138Q8WVD3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.58■□□□□ 0.41
RNF138Q8WVD3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF138Q8WVD3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF138Q8WVD3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RNF138Q8WVD3 AC093484.2-201ENST00000580996 2166 ntBASIC17.58■□□□□ 0.4
RNF138Q8WVD3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF138Q8WVD3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF138Q8WVD3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF138Q8WVD3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.58■□□□□ 0.4
RNF138Q8WVD3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF138Q8WVD3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF138Q8WVD3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.58■□□□□ 0.4
RNF138Q8WVD3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.58■□□□□ 0.4
RNF138Q8WVD3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF138Q8WVD3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF138Q8WVD3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
RNF138Q8WVD3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF138Q8WVD3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF138Q8WVD3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF138Q8WVD3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF138Q8WVD3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF138Q8WVD3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF138Q8WVD3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF138Q8WVD3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF138Q8WVD3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF138Q8WVD3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF138Q8WVD3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms