Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCHCR1Q8TD31 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.22■□□□□ 0.83
CCHCR1Q8TD31 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCHCR1Q8TD31 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCHCR1Q8TD31 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCHCR1Q8TD31 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCHCR1Q8TD31 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCHCR1Q8TD31 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.22■□□□□ 0.83
CCHCR1Q8TD31 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCHCR1Q8TD31 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCHCR1Q8TD31 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.21■□□□□ 0.83
CCHCR1Q8TD31 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCHCR1Q8TD31 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.21■□□□□ 0.83
CCHCR1Q8TD31 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.21■□□□□ 0.83
CCHCR1Q8TD31 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.21■□□□□ 0.83
CCHCR1Q8TD31 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.21■□□□□ 0.83
CCHCR1Q8TD31 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCHCR1Q8TD31 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CCHCR1Q8TD31 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.21■□□□□ 0.83
CCHCR1Q8TD31 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCHCR1Q8TD31 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCHCR1Q8TD31 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.21■□□□□ 0.83
CCHCR1Q8TD31 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
CCHCR1Q8TD31 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
CCHCR1Q8TD31 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCHCR1Q8TD31 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCHCR1Q8TD31 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCHCR1Q8TD31 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCHCR1Q8TD31 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCHCR1Q8TD31 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCHCR1Q8TD31 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.2■□□□□ 0.82
CCHCR1Q8TD31 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCHCR1Q8TD31 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCHCR1Q8TD31 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCHCR1Q8TD31 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCHCR1Q8TD31 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.2■□□□□ 0.82
CCHCR1Q8TD31 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCHCR1Q8TD31 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCHCR1Q8TD31 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CCHCR1Q8TD31 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.2■□□□□ 0.82
CCHCR1Q8TD31 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CCHCR1Q8TD31 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCHCR1Q8TD31 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCHCR1Q8TD31 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCHCR1Q8TD31 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCHCR1Q8TD31 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCHCR1Q8TD31 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCHCR1Q8TD31 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCHCR1Q8TD31 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.19■□□□□ 0.82
CCHCR1Q8TD31 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
CCHCR1Q8TD31 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.19■□□□□ 0.82
CCHCR1Q8TD31 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCHCR1Q8TD31 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCHCR1Q8TD31 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCHCR1Q8TD31 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.19■□□□□ 0.82
CCHCR1Q8TD31 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.19■□□□□ 0.82
CCHCR1Q8TD31 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCHCR1Q8TD31 AC083880.1-201ENST00000608266 535 ntBASIC20.19■□□□□ 0.82
CCHCR1Q8TD31 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.19■□□□□ 0.82
CCHCR1Q8TD31 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
CCHCR1Q8TD31 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.19■□□□□ 0.82
CCHCR1Q8TD31 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCHCR1Q8TD31 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCHCR1Q8TD31 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCHCR1Q8TD31 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCHCR1Q8TD31 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCHCR1Q8TD31 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CCHCR1Q8TD31 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CCHCR1Q8TD31 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCHCR1Q8TD31 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCHCR1Q8TD31 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCHCR1Q8TD31 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCHCR1Q8TD31 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCHCR1Q8TD31 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CCHCR1Q8TD31 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CCHCR1Q8TD31 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCHCR1Q8TD31 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCHCR1Q8TD31 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.18■□□□□ 0.82
CCHCR1Q8TD31 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCHCR1Q8TD31 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.18■□□□□ 0.82
CCHCR1Q8TD31 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCHCR1Q8TD31 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.18■□□□□ 0.82
CCHCR1Q8TD31 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
CCHCR1Q8TD31 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCHCR1Q8TD31 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCHCR1Q8TD31 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCHCR1Q8TD31 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.18■□□□□ 0.82
CCHCR1Q8TD31 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCHCR1Q8TD31 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.18■□□□□ 0.82
CCHCR1Q8TD31 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.18■□□□□ 0.82
CCHCR1Q8TD31 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCHCR1Q8TD31 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CCHCR1Q8TD31 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.17■□□□□ 0.82
CCHCR1Q8TD31 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.17■□□□□ 0.82
CCHCR1Q8TD31 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCHCR1Q8TD31 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCHCR1Q8TD31 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCHCR1Q8TD31 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.17■□□□□ 0.82
CCHCR1Q8TD31 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.17■□□□□ 0.82
CCHCR1Q8TD31 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms