Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SNIP1Q8TAD8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNIP1Q8TAD8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNIP1Q8TAD8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNIP1Q8TAD8 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.33■□□□□ 0.53
SNIP1Q8TAD8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SNIP1Q8TAD8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.33■□□□□ 0.53
SNIP1Q8TAD8 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.33■□□□□ 0.53
SNIP1Q8TAD8 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SNIP1Q8TAD8 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SNIP1Q8TAD8 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNIP1Q8TAD8 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SNIP1Q8TAD8 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.33■□□□□ 0.52
SNIP1Q8TAD8 AC246785.2-201ENST00000432512 513 ntBASIC18.33■□□□□ 0.52
SNIP1Q8TAD8 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNIP1Q8TAD8 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNIP1Q8TAD8 ZNF444P1-201ENST00000559497 298 ntBASIC18.33■□□□□ 0.52
SNIP1Q8TAD8 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.33■□□□□ 0.52
SNIP1Q8TAD8 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.33■□□□□ 0.52
SNIP1Q8TAD8 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.33■□□□□ 0.52
SNIP1Q8TAD8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.33■□□□□ 0.52
SNIP1Q8TAD8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNIP1Q8TAD8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNIP1Q8TAD8 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.33■□□□□ 0.52
SNIP1Q8TAD8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SNIP1Q8TAD8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNIP1Q8TAD8 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNIP1Q8TAD8 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNIP1Q8TAD8 SLC25A24-204ENST00000569674 2357 ntBASIC18.32■□□□□ 0.52
SNIP1Q8TAD8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNIP1Q8TAD8 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.32■□□□□ 0.52
SNIP1Q8TAD8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
SNIP1Q8TAD8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.32■□□□□ 0.52
SNIP1Q8TAD8 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNIP1Q8TAD8 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNIP1Q8TAD8 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.32■□□□□ 0.52
SNIP1Q8TAD8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.32■□□□□ 0.52
SNIP1Q8TAD8 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.32■□□□□ 0.52
SNIP1Q8TAD8 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.32■□□□□ 0.52
SNIP1Q8TAD8 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.32■□□□□ 0.52
SNIP1Q8TAD8 Z85996.1-201ENST00000494644 937 ntBASIC18.32■□□□□ 0.52
SNIP1Q8TAD8 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.32■□□□□ 0.52
SNIP1Q8TAD8 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.32■□□□□ 0.52
SNIP1Q8TAD8 AC083849.1-201ENST00000615227 514 ntBASIC18.32■□□□□ 0.52
SNIP1Q8TAD8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
SNIP1Q8TAD8 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNIP1Q8TAD8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNIP1Q8TAD8 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNIP1Q8TAD8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNIP1Q8TAD8 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNIP1Q8TAD8 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.32■□□□□ 0.52
SNIP1Q8TAD8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNIP1Q8TAD8 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNIP1Q8TAD8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNIP1Q8TAD8 KRT16P6-202ENST00000425692 1426 ntBASIC18.32■□□□□ 0.52
SNIP1Q8TAD8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.31■□□□□ 0.52
SNIP1Q8TAD8 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNIP1Q8TAD8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNIP1Q8TAD8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNIP1Q8TAD8 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNIP1Q8TAD8 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
SNIP1Q8TAD8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.31■□□□□ 0.52
SNIP1Q8TAD8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNIP1Q8TAD8 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNIP1Q8TAD8 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNIP1Q8TAD8 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.31■□□□□ 0.52
SNIP1Q8TAD8 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.31■□□□□ 0.52
SNIP1Q8TAD8 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.31■□□□□ 0.52
SNIP1Q8TAD8 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.31■□□□□ 0.52
SNIP1Q8TAD8 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.31■□□□□ 0.52
SNIP1Q8TAD8 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.31■□□□□ 0.52
SNIP1Q8TAD8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNIP1Q8TAD8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNIP1Q8TAD8 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNIP1Q8TAD8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.31■□□□□ 0.52
SNIP1Q8TAD8 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SNIP1Q8TAD8 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SNIP1Q8TAD8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNIP1Q8TAD8 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.31■□□□□ 0.52
SNIP1Q8TAD8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.31■□□□□ 0.52
SNIP1Q8TAD8 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNIP1Q8TAD8 AC244015.2-201ENST00000616358 1861 ntBASIC18.31■□□□□ 0.52
SNIP1Q8TAD8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.31■□□□□ 0.52
SNIP1Q8TAD8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNIP1Q8TAD8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNIP1Q8TAD8 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.3■□□□□ 0.52
SNIP1Q8TAD8 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNIP1Q8TAD8 AC112907.2-201ENST00000448639 330 ntBASIC18.3■□□□□ 0.52
SNIP1Q8TAD8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.3■□□□□ 0.52
SNIP1Q8TAD8 AL121603.2-201ENST00000557373 2117 ntBASIC18.3■□□□□ 0.52
SNIP1Q8TAD8 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
SNIP1Q8TAD8 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SNIP1Q8TAD8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNIP1Q8TAD8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.3■□□□□ 0.52
SNIP1Q8TAD8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNIP1Q8TAD8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SNIP1Q8TAD8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNIP1Q8TAD8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNIP1Q8TAD8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNIP1Q8TAD8 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms