Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BBS1Q8NFJ9 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BBS1Q8NFJ9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
BBS1Q8NFJ9 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BBS1Q8NFJ9 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BBS1Q8NFJ9 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
BBS1Q8NFJ9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BBS1Q8NFJ9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BBS1Q8NFJ9 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
BBS1Q8NFJ9 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BBS1Q8NFJ9 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BBS1Q8NFJ9 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
BBS1Q8NFJ9 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BBS1Q8NFJ9 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BBS1Q8NFJ9 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
BBS1Q8NFJ9 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.46■□□□□ 0.39
BBS1Q8NFJ9 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BBS1Q8NFJ9 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.46■□□□□ 0.39
BBS1Q8NFJ9 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.46■□□□□ 0.39
BBS1Q8NFJ9 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.46■□□□□ 0.39
BBS1Q8NFJ9 AC231657.2-201ENST00000624556 255 ntBASIC17.46■□□□□ 0.39
BBS1Q8NFJ9 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.46■□□□□ 0.39
BBS1Q8NFJ9 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
BBS1Q8NFJ9 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BBS1Q8NFJ9 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BBS1Q8NFJ9 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.46■□□□□ 0.39
BBS1Q8NFJ9 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
BBS1Q8NFJ9 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
BBS1Q8NFJ9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BBS1Q8NFJ9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
BBS1Q8NFJ9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.46■□□□□ 0.39
BBS1Q8NFJ9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
BBS1Q8NFJ9 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.46■□□□□ 0.38
BBS1Q8NFJ9 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
BBS1Q8NFJ9 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
BBS1Q8NFJ9 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
BBS1Q8NFJ9 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BBS1Q8NFJ9 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BBS1Q8NFJ9 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BBS1Q8NFJ9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BBS1Q8NFJ9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
BBS1Q8NFJ9 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
BBS1Q8NFJ9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BBS1Q8NFJ9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.45■□□□□ 0.38
BBS1Q8NFJ9 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.45■□□□□ 0.38
BBS1Q8NFJ9 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.45■□□□□ 0.38
BBS1Q8NFJ9 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BBS1Q8NFJ9 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
BBS1Q8NFJ9 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.45■□□□□ 0.38
BBS1Q8NFJ9 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.45■□□□□ 0.38
BBS1Q8NFJ9 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.45■□□□□ 0.38
BBS1Q8NFJ9 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.45■□□□□ 0.38
BBS1Q8NFJ9 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BBS1Q8NFJ9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BBS1Q8NFJ9 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BBS1Q8NFJ9 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.45■□□□□ 0.38
BBS1Q8NFJ9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.45■□□□□ 0.38
BBS1Q8NFJ9 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.45■□□□□ 0.38
BBS1Q8NFJ9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.45■□□□□ 0.38
BBS1Q8NFJ9 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.45■□□□□ 0.38
BBS1Q8NFJ9 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BBS1Q8NFJ9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BBS1Q8NFJ9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BBS1Q8NFJ9 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BBS1Q8NFJ9 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.45■□□□□ 0.38
BBS1Q8NFJ9 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BBS1Q8NFJ9 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BBS1Q8NFJ9 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BBS1Q8NFJ9 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BBS1Q8NFJ9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
BBS1Q8NFJ9 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BBS1Q8NFJ9 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BBS1Q8NFJ9 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BBS1Q8NFJ9 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.44■□□□□ 0.38
BBS1Q8NFJ9 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BBS1Q8NFJ9 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
BBS1Q8NFJ9 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BBS1Q8NFJ9 GPX1P1-201ENST00000388829 606 ntBASIC17.44■□□□□ 0.38
BBS1Q8NFJ9 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
BBS1Q8NFJ9 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.44■□□□□ 0.38
BBS1Q8NFJ9 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.44■□□□□ 0.38
BBS1Q8NFJ9 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BBS1Q8NFJ9 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.44■□□□□ 0.38
BBS1Q8NFJ9 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.44■□□□□ 0.38
BBS1Q8NFJ9 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BBS1Q8NFJ9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BBS1Q8NFJ9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BBS1Q8NFJ9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BBS1Q8NFJ9 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BBS1Q8NFJ9 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BBS1Q8NFJ9 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.43■□□□□ 0.38
BBS1Q8NFJ9 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.43■□□□□ 0.38
BBS1Q8NFJ9 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BBS1Q8NFJ9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BBS1Q8NFJ9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
BBS1Q8NFJ9 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
BBS1Q8NFJ9 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BBS1Q8NFJ9 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.43■□□□□ 0.38
BBS1Q8NFJ9 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BBS1Q8NFJ9 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms