Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 KRT8P8-201ENST00000434750 1448 ntBASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 AC005332.7-201ENST00000614046 2005 ntBASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 TUBB8P6-201ENST00000436895 1288 ntBASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 KRT18P16-201ENST00000510337 1294 ntBASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TTC9CQ8N5M4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TTC9CQ8N5M4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.33■□□□□ 0.05
TTC9CQ8N5M4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TTC9CQ8N5M4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TTC9CQ8N5M4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.33■□□□□ 0.04
TTC9CQ8N5M4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TTC9CQ8N5M4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TTC9CQ8N5M4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TTC9CQ8N5M4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TTC9CQ8N5M4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TTC9CQ8N5M4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.33■□□□□ 0.04
TTC9CQ8N5M4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC15.33■□□□□ 0.04
TTC9CQ8N5M4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC15.33■□□□□ 0.04
TTC9CQ8N5M4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC15.33■□□□□ 0.04
TTC9CQ8N5M4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TTC9CQ8N5M4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.33■□□□□ 0.04
TTC9CQ8N5M4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.33■□□□□ 0.04
TTC9CQ8N5M4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC15.33■□□□□ 0.04
TTC9CQ8N5M4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC15.33■□□□□ 0.04
TTC9CQ8N5M4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.33■□□□□ 0.04
TTC9CQ8N5M4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TTC9CQ8N5M4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.33■□□□□ 0.04
TTC9CQ8N5M4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
TTC9CQ8N5M4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TTC9CQ8N5M4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC15.33■□□□□ 0.04
TTC9CQ8N5M4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TTC9CQ8N5M4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TTC9CQ8N5M4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TTC9CQ8N5M4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TTC9CQ8N5M4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
TTC9CQ8N5M4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TTC9CQ8N5M4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TTC9CQ8N5M4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.32■□□□□ 0.04
TTC9CQ8N5M4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TTC9CQ8N5M4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
TTC9CQ8N5M4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TTC9CQ8N5M4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TTC9CQ8N5M4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TTC9CQ8N5M4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TTC9CQ8N5M4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TTC9CQ8N5M4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC15.32■□□□□ 0.04
TTC9CQ8N5M4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TTC9CQ8N5M4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.32■□□□□ 0.04
TTC9CQ8N5M4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.32■□□□□ 0.04
TTC9CQ8N5M4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TTC9CQ8N5M4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.32■□□□□ 0.04
TTC9CQ8N5M4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.32■□□□□ 0.04
TTC9CQ8N5M4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TTC9CQ8N5M4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms