Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC24.07■■□□□ 1.44
SMC5Q8IY18 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SMC5Q8IY18 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC24.07■■□□□ 1.44
SMC5Q8IY18 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SMC5Q8IY18 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC24.07■■□□□ 1.44
SMC5Q8IY18 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC24.07■■□□□ 1.44
SMC5Q8IY18 Six3os1_6.1-201ENST00000620790 196 ntBASIC24.07■■□□□ 1.44
SMC5Q8IY18 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SMC5Q8IY18 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
SMC5Q8IY18 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SMC5Q8IY18 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC24.07■■□□□ 1.44
SMC5Q8IY18 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
SMC5Q8IY18 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
SMC5Q8IY18 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SMC5Q8IY18 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC24.07■■□□□ 1.44
SMC5Q8IY18 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
SMC5Q8IY18 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC24.06■■□□□ 1.44
SMC5Q8IY18 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SMC5Q8IY18 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
SMC5Q8IY18 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC24.06■■□□□ 1.44
SMC5Q8IY18 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
SMC5Q8IY18 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SMC5Q8IY18 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC24.06■■□□□ 1.44
SMC5Q8IY18 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SMC5Q8IY18 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SMC5Q8IY18 AL355802.2-201ENST00000402069 882 ntBASIC24.06■■□□□ 1.44
SMC5Q8IY18 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC24.06■■□□□ 1.44
SMC5Q8IY18 TUBB8P6-201ENST00000436895 1288 ntBASIC24.06■■□□□ 1.44
SMC5Q8IY18 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC24.06■■□□□ 1.44
SMC5Q8IY18 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC24.06■■□□□ 1.44
SMC5Q8IY18 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SMC5Q8IY18 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SMC5Q8IY18 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC24.06■■□□□ 1.44
SMC5Q8IY18 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC24.06■■□□□ 1.44
SMC5Q8IY18 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
SMC5Q8IY18 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SMC5Q8IY18 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SMC5Q8IY18 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SMC5Q8IY18 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SMC5Q8IY18 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
SMC5Q8IY18 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC24.06■■□□□ 1.44
SMC5Q8IY18 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC24.06■■□□□ 1.44
SMC5Q8IY18 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SMC5Q8IY18 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
SMC5Q8IY18 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC24.05■■□□□ 1.44
SMC5Q8IY18 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC24.05■■□□□ 1.44
SMC5Q8IY18 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
SMC5Q8IY18 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC24.05■■□□□ 1.44
SMC5Q8IY18 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC24.05■■□□□ 1.44
SMC5Q8IY18 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC24.05■■□□□ 1.44
SMC5Q8IY18 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC24.05■■□□□ 1.44
SMC5Q8IY18 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
SMC5Q8IY18 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC24.05■■□□□ 1.44
SMC5Q8IY18 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
SMC5Q8IY18 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC24.05■■□□□ 1.44
SMC5Q8IY18 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
SMC5Q8IY18 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SMC5Q8IY18 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC24.05■■□□□ 1.44
SMC5Q8IY18 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC24.05■■□□□ 1.44
SMC5Q8IY18 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SMC5Q8IY18 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC24.04■■□□□ 1.44
SMC5Q8IY18 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
SMC5Q8IY18 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SMC5Q8IY18 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
SMC5Q8IY18 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC24.04■■□□□ 1.44
SMC5Q8IY18 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC24.04■■□□□ 1.44
SMC5Q8IY18 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC24.04■■□□□ 1.44
SMC5Q8IY18 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC24.04■■□□□ 1.44
SMC5Q8IY18 EMC9-206ENST00000560403 872 ntTSL 2 BASIC24.04■■□□□ 1.44
SMC5Q8IY18 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
SMC5Q8IY18 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SMC5Q8IY18 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SMC5Q8IY18 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC24.04■■□□□ 1.44
SMC5Q8IY18 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
SMC5Q8IY18 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
SMC5Q8IY18 AC006333.2-201ENST00000607957 2099 ntBASIC24.04■■□□□ 1.44
SMC5Q8IY18 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SMC5Q8IY18 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SMC5Q8IY18 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC24.04■■□□□ 1.44
SMC5Q8IY18 FP475955.4-201ENST00000623131 1990 ntBASIC24.03■■□□□ 1.44
SMC5Q8IY18 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SMC5Q8IY18 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
SMC5Q8IY18 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC24.03■■□□□ 1.44
SMC5Q8IY18 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SMC5Q8IY18 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SMC5Q8IY18 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SMC5Q8IY18 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC24.03■■□□□ 1.44
SMC5Q8IY18 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC24.03■■□□□ 1.44
SMC5Q8IY18 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC24.03■■□□□ 1.44
SMC5Q8IY18 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
SMC5Q8IY18 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SMC5Q8IY18 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SMC5Q8IY18 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC24.03■■□□□ 1.44
SMC5Q8IY18 THEM4-205ENST00000489410 643 ntTSL 2 BASIC24.03■■□□□ 1.44
SMC5Q8IY18 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC24.03■■□□□ 1.44
SMC5Q8IY18 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
SMC5Q8IY18 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC24.03■■□□□ 1.44
SMC5Q8IY18 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC24.03■■□□□ 1.44
SMC5Q8IY18 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SMC5Q8IY18 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC24.03■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms