Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SCN4BQ8IWT1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SCN4BQ8IWT1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.5■□□□□ 0.87
SCN4BQ8IWT1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.5■□□□□ 0.87
SCN4BQ8IWT1 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.5■□□□□ 0.87
SCN4BQ8IWT1 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
SCN4BQ8IWT1 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.5■□□□□ 0.87
SCN4BQ8IWT1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCN4BQ8IWT1 KRT8P9-201ENST00000558927 1449 ntBASIC20.5■□□□□ 0.87
SCN4BQ8IWT1 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.5■□□□□ 0.87
SCN4BQ8IWT1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.5■□□□□ 0.87
SCN4BQ8IWT1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SCN4BQ8IWT1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCN4BQ8IWT1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCN4BQ8IWT1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCN4BQ8IWT1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCN4BQ8IWT1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCN4BQ8IWT1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCN4BQ8IWT1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCN4BQ8IWT1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCN4BQ8IWT1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.49■□□□□ 0.87
SCN4BQ8IWT1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCN4BQ8IWT1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SCN4BQ8IWT1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCN4BQ8IWT1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCN4BQ8IWT1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCN4BQ8IWT1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCN4BQ8IWT1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SCN4BQ8IWT1 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.49■□□□□ 0.87
SCN4BQ8IWT1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.49■□□□□ 0.87
SCN4BQ8IWT1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.49■□□□□ 0.87
SCN4BQ8IWT1 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.49■□□□□ 0.87
SCN4BQ8IWT1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCN4BQ8IWT1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
SCN4BQ8IWT1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCN4BQ8IWT1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.49■□□□□ 0.87
SCN4BQ8IWT1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.49■□□□□ 0.87
SCN4BQ8IWT1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCN4BQ8IWT1 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCN4BQ8IWT1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCN4BQ8IWT1 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
SCN4BQ8IWT1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.48■□□□□ 0.87
SCN4BQ8IWT1 RCC2P6-201ENST00000526625 1557 ntBASIC20.48■□□□□ 0.87
SCN4BQ8IWT1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.48■□□□□ 0.87
SCN4BQ8IWT1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.48■□□□□ 0.87
SCN4BQ8IWT1 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCN4BQ8IWT1 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCN4BQ8IWT1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SCN4BQ8IWT1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SCN4BQ8IWT1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.48■□□□□ 0.87
SCN4BQ8IWT1 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.48■□□□□ 0.87
SCN4BQ8IWT1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.48■□□□□ 0.87
SCN4BQ8IWT1 AC011298.2-201ENST00000617989 482 ntBASIC20.48■□□□□ 0.87
SCN4BQ8IWT1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCN4BQ8IWT1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.48■□□□□ 0.87
SCN4BQ8IWT1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SCN4BQ8IWT1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.48■□□□□ 0.87
SCN4BQ8IWT1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCN4BQ8IWT1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCN4BQ8IWT1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SCN4BQ8IWT1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.48■□□□□ 0.87
SCN4BQ8IWT1 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SCN4BQ8IWT1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCN4BQ8IWT1 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCN4BQ8IWT1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.47■□□□□ 0.87
SCN4BQ8IWT1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCN4BQ8IWT1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.47■□□□□ 0.87
SCN4BQ8IWT1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.47■□□□□ 0.87
SCN4BQ8IWT1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCN4BQ8IWT1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCN4BQ8IWT1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCN4BQ8IWT1 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCN4BQ8IWT1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCN4BQ8IWT1 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.47■□□□□ 0.87
SCN4BQ8IWT1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SCN4BQ8IWT1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.47■□□□□ 0.87
SCN4BQ8IWT1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.47■□□□□ 0.87
SCN4BQ8IWT1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SCN4BQ8IWT1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCN4BQ8IWT1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.47■□□□□ 0.87
SCN4BQ8IWT1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCN4BQ8IWT1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.47■□□□□ 0.87
SCN4BQ8IWT1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.47■□□□□ 0.87
SCN4BQ8IWT1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCN4BQ8IWT1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SCN4BQ8IWT1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCN4BQ8IWT1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCN4BQ8IWT1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SCN4BQ8IWT1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCN4BQ8IWT1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SCN4BQ8IWT1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCN4BQ8IWT1 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCN4BQ8IWT1 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCN4BQ8IWT1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCN4BQ8IWT1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SCN4BQ8IWT1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCN4BQ8IWT1 AC004951.3-201ENST00000418645 1148 ntBASIC20.46■□□□□ 0.87
SCN4BQ8IWT1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.46■□□□□ 0.87
SCN4BQ8IWT1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.46■□□□□ 0.87
SCN4BQ8IWT1 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms