Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRTM4Q86VH4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.09■□□□□ 0.65
LRRTM4Q86VH4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.09■□□□□ 0.65
LRRTM4Q86VH4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRTM4Q86VH4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LRRTM4Q86VH4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.08■□□□□ 0.65
LRRTM4Q86VH4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LRRTM4Q86VH4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LRRTM4Q86VH4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRRTM4Q86VH4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRRTM4Q86VH4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRRTM4Q86VH4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
LRRTM4Q86VH4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.08■□□□□ 0.64
LRRTM4Q86VH4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.08■□□□□ 0.64
LRRTM4Q86VH4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
LRRTM4Q86VH4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
LRRTM4Q86VH4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRRTM4Q86VH4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.08■□□□□ 0.64
LRRTM4Q86VH4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.08■□□□□ 0.64
LRRTM4Q86VH4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRRTM4Q86VH4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRTM4Q86VH4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRTM4Q86VH4 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.08■□□□□ 0.64
LRRTM4Q86VH4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRTM4Q86VH4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.08■□□□□ 0.64
LRRTM4Q86VH4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRTM4Q86VH4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRTM4Q86VH4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRTM4Q86VH4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
LRRTM4Q86VH4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
LRRTM4Q86VH4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.08■□□□□ 0.64
LRRTM4Q86VH4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRTM4Q86VH4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRTM4Q86VH4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRRTM4Q86VH4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRTM4Q86VH4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRTM4Q86VH4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.07■□□□□ 0.64
LRRTM4Q86VH4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRTM4Q86VH4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRTM4Q86VH4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRRTM4Q86VH4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.07■□□□□ 0.64
LRRTM4Q86VH4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.07■□□□□ 0.64
LRRTM4Q86VH4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRRTM4Q86VH4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
LRRTM4Q86VH4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.07■□□□□ 0.64
LRRTM4Q86VH4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.07■□□□□ 0.64
LRRTM4Q86VH4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.07■□□□□ 0.64
LRRTM4Q86VH4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRTM4Q86VH4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.07■□□□□ 0.64
LRRTM4Q86VH4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.07■□□□□ 0.64
LRRTM4Q86VH4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRTM4Q86VH4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRRTM4Q86VH4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRTM4Q86VH4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRTM4Q86VH4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRRTM4Q86VH4 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.06■□□□□ 0.64
LRRTM4Q86VH4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
LRRTM4Q86VH4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRTM4Q86VH4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRRTM4Q86VH4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRRTM4Q86VH4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRTM4Q86VH4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRRTM4Q86VH4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
LRRTM4Q86VH4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.06■□□□□ 0.64
LRRTM4Q86VH4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.06■□□□□ 0.64
LRRTM4Q86VH4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.06■□□□□ 0.64
LRRTM4Q86VH4 AC116562.2-201ENST00000507042 360 ntBASIC19.06■□□□□ 0.64
LRRTM4Q86VH4 AL355075.4-201ENST00000554988 638 ntBASIC19.06■□□□□ 0.64
LRRTM4Q86VH4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.06■□□□□ 0.64
LRRTM4Q86VH4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.06■□□□□ 0.64
LRRTM4Q86VH4 AL160286.2-201ENST00000567150 934 ntBASIC19.06■□□□□ 0.64
LRRTM4Q86VH4 REXO1L10P-201ENST00000615707 1290 ntBASIC19.06■□□□□ 0.64
LRRTM4Q86VH4 REXO1L12P-201ENST00000622156 912 ntBASIC19.06■□□□□ 0.64
LRRTM4Q86VH4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRTM4Q86VH4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
LRRTM4Q86VH4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.06■□□□□ 0.64
LRRTM4Q86VH4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRTM4Q86VH4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.06■□□□□ 0.64
LRRTM4Q86VH4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRTM4Q86VH4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
LRRTM4Q86VH4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
LRRTM4Q86VH4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRTM4Q86VH4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
LRRTM4Q86VH4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.05■□□□□ 0.64
LRRTM4Q86VH4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.05■□□□□ 0.64
LRRTM4Q86VH4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRTM4Q86VH4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRTM4Q86VH4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRTM4Q86VH4 FSCN1P1-201ENST00000568912 1481 ntBASIC19.05■□□□□ 0.64
LRRTM4Q86VH4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
LRRTM4Q86VH4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRTM4Q86VH4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.05■□□□□ 0.64
LRRTM4Q86VH4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.05■□□□□ 0.64
LRRTM4Q86VH4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.05■□□□□ 0.64
LRRTM4Q86VH4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.05■□□□□ 0.64
LRRTM4Q86VH4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
LRRTM4Q86VH4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
LRRTM4Q86VH4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRTM4Q86VH4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRTM4Q86VH4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms