Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf139Q6ZV77 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf139Q6ZV77 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf139Q6ZV77 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf139Q6ZV77 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf139Q6ZV77 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf139Q6ZV77 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf139Q6ZV77 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf139Q6ZV77 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.69■□□□□ 0.1
C9orf139Q6ZV77 LIN28AP1-201ENST00000429574 405 ntBASIC15.69■□□□□ 0.1
C9orf139Q6ZV77 MFAP1P1-201ENST00000442257 1255 ntBASIC15.69■□□□□ 0.1
C9orf139Q6ZV77 CCR12P-201ENST00000446203 998 ntBASIC15.69■□□□□ 0.1
C9orf139Q6ZV77 AC008040.2-201ENST00000461049 708 ntBASIC15.69■□□□□ 0.1
C9orf139Q6ZV77 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf139Q6ZV77 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.69■□□□□ 0.1
C9orf139Q6ZV77 CFL2-205ENST00000555765 632 ntTSL 2 BASIC15.69■□□□□ 0.1
C9orf139Q6ZV77 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.69■□□□□ 0.1
C9orf139Q6ZV77 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.69■□□□□ 0.1
C9orf139Q6ZV77 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.69■□□□□ 0.1
C9orf139Q6ZV77 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.69■□□□□ 0.1
C9orf139Q6ZV77 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf139Q6ZV77 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
C9orf139Q6ZV77 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf139Q6ZV77 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.69■□□□□ 0.1
C9orf139Q6ZV77 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.68■□□□□ 0.1
C9orf139Q6ZV77 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
C9orf139Q6ZV77 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf139Q6ZV77 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf139Q6ZV77 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf139Q6ZV77 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf139Q6ZV77 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf139Q6ZV77 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf139Q6ZV77 MOK-225ENST00000522867 1883 ntTSL 5 BASIC15.68■□□□□ 0.1
C9orf139Q6ZV77 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf139Q6ZV77 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf139Q6ZV77 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
C9orf139Q6ZV77 AC091390.4-202ENST00000476426 537 ntBASIC15.68■□□□□ 0.1
C9orf139Q6ZV77 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.68■□□□□ 0.1
C9orf139Q6ZV77 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.68■□□□□ 0.1
C9orf139Q6ZV77 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf139Q6ZV77 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
C9orf139Q6ZV77 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.68■□□□□ 0.1
C9orf139Q6ZV77 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.68■□□□□ 0.1
C9orf139Q6ZV77 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.68■□□□□ 0.1
C9orf139Q6ZV77 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.68■□□□□ 0.1
C9orf139Q6ZV77 FAM87A-204ENST00000613235 858 ntBASIC15.68■□□□□ 0.1
C9orf139Q6ZV77 AC116562.4-202ENST00000641738 218 ntBASIC15.68■□□□□ 0.1
C9orf139Q6ZV77 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf139Q6ZV77 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf139Q6ZV77 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf139Q6ZV77 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC15.68■□□□□ 0.1
C9orf139Q6ZV77 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf139Q6ZV77 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf139Q6ZV77 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C9orf139Q6ZV77 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC15.68■□□□□ 0.1
C9orf139Q6ZV77 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.68■□□□□ 0.1
C9orf139Q6ZV77 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 HMGA1P5-201ENST00000412453 271 ntBASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 ATP5G1P1-201ENST00000448724 379 ntBASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 ECEL1P2-202ENST00000465689 757 ntBASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 AC010203.1-204ENST00000548782 407 ntBASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 AL160286.2-201ENST00000567150 934 ntBASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 AC010653.2-201ENST00000623505 997 ntBASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 FEM1AP1-201ENST00000431297 1995 ntBASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC15.67■□□□□ 0.1
C9orf139Q6ZV77 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf139Q6ZV77 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
C9orf139Q6ZV77 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf139Q6ZV77 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf139Q6ZV77 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf139Q6ZV77 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf139Q6ZV77 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf139Q6ZV77 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC15.66■□□□□ 0.1
C9orf139Q6ZV77 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.66■□□□□ 0.1
C9orf139Q6ZV77 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf139Q6ZV77 ARMC10P1-201ENST00000313754 855 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms