Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COLCA1Q6ZS62 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COLCA1Q6ZS62 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.73■□□□□ 0.27
COLCA1Q6ZS62 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.73■□□□□ 0.27
COLCA1Q6ZS62 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.73■□□□□ 0.27
COLCA1Q6ZS62 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COLCA1Q6ZS62 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
COLCA1Q6ZS62 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
COLCA1Q6ZS62 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COLCA1Q6ZS62 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.73■□□□□ 0.27
COLCA1Q6ZS62 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
COLCA1Q6ZS62 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
COLCA1Q6ZS62 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
COLCA1Q6ZS62 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
COLCA1Q6ZS62 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
COLCA1Q6ZS62 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COLCA1Q6ZS62 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
COLCA1Q6ZS62 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.73■□□□□ 0.27
COLCA1Q6ZS62 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 SDHAP1-207ENST00000440850 2000 ntBASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 FAM201B-201ENST00000458407 597 ntBASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 ITM2C-210ENST00000620962 501 ntBASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 HLA-A-209ENST00000638375 975 ntBASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COLCA1Q6ZS62 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 AC141586.3-201ENST00000562166 1838 ntBASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 TSPY20P-201ENST00000450910 630 ntBASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 BX323043.1-201ENST00000641006 1765 ntBASIC16.71■□□□□ 0.27
COLCA1Q6ZS62 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.26
COLCA1Q6ZS62 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms