Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C11orf88Q6PI97 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C11orf88Q6PI97 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
C11orf88Q6PI97 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.88■□□□□ 0.29
C11orf88Q6PI97 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.88■□□□□ 0.29
C11orf88Q6PI97 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
C11orf88Q6PI97 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.88■□□□□ 0.29
C11orf88Q6PI97 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.88■□□□□ 0.29
C11orf88Q6PI97 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
C11orf88Q6PI97 AC053503.5-201ENST00000601508 636 ntBASIC16.88■□□□□ 0.29
C11orf88Q6PI97 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.88■□□□□ 0.29
C11orf88Q6PI97 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C11orf88Q6PI97 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
C11orf88Q6PI97 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C11orf88Q6PI97 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.88■□□□□ 0.29
C11orf88Q6PI97 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.88■□□□□ 0.29
C11orf88Q6PI97 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
C11orf88Q6PI97 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.88■□□□□ 0.29
C11orf88Q6PI97 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C11orf88Q6PI97 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
C11orf88Q6PI97 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.88■□□□□ 0.29
C11orf88Q6PI97 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.88■□□□□ 0.29
C11orf88Q6PI97 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C11orf88Q6PI97 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
C11orf88Q6PI97 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
C11orf88Q6PI97 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C11orf88Q6PI97 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C11orf88Q6PI97 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
C11orf88Q6PI97 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
C11orf88Q6PI97 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
C11orf88Q6PI97 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
C11orf88Q6PI97 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
C11orf88Q6PI97 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
C11orf88Q6PI97 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
C11orf88Q6PI97 EEF1DP3-203ENST00000566025 782 ntBASIC16.87■□□□□ 0.29
C11orf88Q6PI97 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.87■□□□□ 0.29
C11orf88Q6PI97 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.87■□□□□ 0.29
C11orf88Q6PI97 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
C11orf88Q6PI97 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C11orf88Q6PI97 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
C11orf88Q6PI97 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
C11orf88Q6PI97 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
C11orf88Q6PI97 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
C11orf88Q6PI97 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
C11orf88Q6PI97 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C11orf88Q6PI97 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
C11orf88Q6PI97 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
C11orf88Q6PI97 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C11orf88Q6PI97 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C11orf88Q6PI97 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C11orf88Q6PI97 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
C11orf88Q6PI97 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
C11orf88Q6PI97 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
C11orf88Q6PI97 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
C11orf88Q6PI97 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C11orf88Q6PI97 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C11orf88Q6PI97 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.86■□□□□ 0.29
C11orf88Q6PI97 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C11orf88Q6PI97 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
C11orf88Q6PI97 NCF1B-203ENST00000435988 1254 ntBASIC16.86■□□□□ 0.29
C11orf88Q6PI97 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
C11orf88Q6PI97 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.86■□□□□ 0.29
C11orf88Q6PI97 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.86■□□□□ 0.29
C11orf88Q6PI97 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
C11orf88Q6PI97 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.86■□□□□ 0.29
C11orf88Q6PI97 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.86■□□□□ 0.29
C11orf88Q6PI97 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.86■□□□□ 0.29
C11orf88Q6PI97 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.86■□□□□ 0.29
C11orf88Q6PI97 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
C11orf88Q6PI97 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.86■□□□□ 0.29
C11orf88Q6PI97 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
C11orf88Q6PI97 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
C11orf88Q6PI97 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C11orf88Q6PI97 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.86■□□□□ 0.29
C11orf88Q6PI97 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
C11orf88Q6PI97 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C11orf88Q6PI97 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.85■□□□□ 0.29
C11orf88Q6PI97 AC138907.5-202ENST00000569484 235 ntBASIC16.85■□□□□ 0.29
C11orf88Q6PI97 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms