Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.24■□□□□ 0.83
TTC39BQ5VTQ0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
TTC39BQ5VTQ0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TTC39BQ5VTQ0 AC009237.14-201ENST00000609975 1594 ntBASIC20.24■□□□□ 0.83
TTC39BQ5VTQ0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
TTC39BQ5VTQ0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TTC39BQ5VTQ0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TTC39BQ5VTQ0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.24■□□□□ 0.83
TTC39BQ5VTQ0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TTC39BQ5VTQ0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
TTC39BQ5VTQ0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TTC39BQ5VTQ0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TTC39BQ5VTQ0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TTC39BQ5VTQ0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TTC39BQ5VTQ0 BX323043.1-201ENST00000641006 1765 ntBASIC20.23■□□□□ 0.83
TTC39BQ5VTQ0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TTC39BQ5VTQ0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TTC39BQ5VTQ0 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TTC39BQ5VTQ0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TTC39BQ5VTQ0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TTC39BQ5VTQ0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TTC39BQ5VTQ0 RPS2P55-201ENST00000397318 883 ntBASIC20.23■□□□□ 0.83
TTC39BQ5VTQ0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.23■□□□□ 0.83
TTC39BQ5VTQ0 AC107956.1-201ENST00000494359 873 ntBASIC20.23■□□□□ 0.83
TTC39BQ5VTQ0 KRT18P16-201ENST00000510337 1294 ntBASIC20.23■□□□□ 0.83
TTC39BQ5VTQ0 AC233702.5-201ENST00000584107 538 ntBASIC20.23■□□□□ 0.83
TTC39BQ5VTQ0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TTC39BQ5VTQ0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.23■□□□□ 0.83
TTC39BQ5VTQ0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TTC39BQ5VTQ0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TTC39BQ5VTQ0 AC018445.3-201ENST00000624177 1945 ntBASIC20.23■□□□□ 0.83
TTC39BQ5VTQ0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TTC39BQ5VTQ0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.23■□□□□ 0.83
TTC39BQ5VTQ0 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.22■□□□□ 0.83
TTC39BQ5VTQ0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TTC39BQ5VTQ0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TTC39BQ5VTQ0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TTC39BQ5VTQ0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
TTC39BQ5VTQ0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TTC39BQ5VTQ0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TTC39BQ5VTQ0 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.22■□□□□ 0.83
TTC39BQ5VTQ0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TTC39BQ5VTQ0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TTC39BQ5VTQ0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TTC39BQ5VTQ0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.22■□□□□ 0.83
TTC39BQ5VTQ0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TTC39BQ5VTQ0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TTC39BQ5VTQ0 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TTC39BQ5VTQ0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TTC39BQ5VTQ0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.22■□□□□ 0.83
TTC39BQ5VTQ0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.22■□□□□ 0.83
TTC39BQ5VTQ0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TTC39BQ5VTQ0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TTC39BQ5VTQ0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.22■□□□□ 0.83
TTC39BQ5VTQ0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TTC39BQ5VTQ0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
TTC39BQ5VTQ0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 TUBB8P6-201ENST00000436895 1288 ntBASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 HTR7P1-201ENST00000538670 1336 ntBASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.21■□□□□ 0.83
TTC39BQ5VTQ0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
TTC39BQ5VTQ0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TTC39BQ5VTQ0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TTC39BQ5VTQ0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
TTC39BQ5VTQ0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TTC39BQ5VTQ0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TTC39BQ5VTQ0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TTC39BQ5VTQ0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TTC39BQ5VTQ0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms