Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.51■□□□□ 0.23
ARFGEF3Q5TH69 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ARFGEF3Q5TH69 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ARFGEF3Q5TH69 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ARFGEF3Q5TH69 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
ARFGEF3Q5TH69 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ARFGEF3Q5TH69 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.51■□□□□ 0.23
ARFGEF3Q5TH69 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ARFGEF3Q5TH69 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.51■□□□□ 0.23
ARFGEF3Q5TH69 AC131212.4-201ENST00000623606 975 ntBASIC16.51■□□□□ 0.23
ARFGEF3Q5TH69 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ARFGEF3Q5TH69 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
ARFGEF3Q5TH69 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.51■□□□□ 0.23
ARFGEF3Q5TH69 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ARFGEF3Q5TH69 AC073508.3-201ENST00000619697 1419 ntBASIC16.51■□□□□ 0.23
ARFGEF3Q5TH69 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.51■□□□□ 0.23
ARFGEF3Q5TH69 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ARFGEF3Q5TH69 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
ARFGEF3Q5TH69 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
ARFGEF3Q5TH69 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARFGEF3Q5TH69 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARFGEF3Q5TH69 AC073130.3-201ENST00000624389 2278 ntBASIC16.5■□□□□ 0.23
ARFGEF3Q5TH69 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARFGEF3Q5TH69 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.5■□□□□ 0.23
ARFGEF3Q5TH69 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.5■□□□□ 0.23
ARFGEF3Q5TH69 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARFGEF3Q5TH69 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.5■□□□□ 0.23
ARFGEF3Q5TH69 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.5■□□□□ 0.23
ARFGEF3Q5TH69 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.5■□□□□ 0.23
ARFGEF3Q5TH69 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.5■□□□□ 0.23
ARFGEF3Q5TH69 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARFGEF3Q5TH69 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARFGEF3Q5TH69 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARFGEF3Q5TH69 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.5■□□□□ 0.23
ARFGEF3Q5TH69 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARFGEF3Q5TH69 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARFGEF3Q5TH69 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARFGEF3Q5TH69 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.5■□□□□ 0.23
ARFGEF3Q5TH69 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ARFGEF3Q5TH69 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARFGEF3Q5TH69 AC004980.1-204ENST00000429707 299 ntBASIC16.5■□□□□ 0.23
ARFGEF3Q5TH69 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.5■□□□□ 0.23
ARFGEF3Q5TH69 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.5■□□□□ 0.23
ARFGEF3Q5TH69 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.5■□□□□ 0.23
ARFGEF3Q5TH69 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.5■□□□□ 0.23
ARFGEF3Q5TH69 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.5■□□□□ 0.23
ARFGEF3Q5TH69 AC010331.1-201ENST00000611423 582 ntBASIC16.5■□□□□ 0.23
ARFGEF3Q5TH69 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARFGEF3Q5TH69 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARFGEF3Q5TH69 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.49■□□□□ 0.23
ARFGEF3Q5TH69 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ARFGEF3Q5TH69 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ARFGEF3Q5TH69 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARFGEF3Q5TH69 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ARFGEF3Q5TH69 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARFGEF3Q5TH69 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.49■□□□□ 0.23
ARFGEF3Q5TH69 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ARFGEF3Q5TH69 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ARFGEF3Q5TH69 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ARFGEF3Q5TH69 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ARFGEF3Q5TH69 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARFGEF3Q5TH69 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.49■□□□□ 0.23
ARFGEF3Q5TH69 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARFGEF3Q5TH69 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARFGEF3Q5TH69 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.48■□□□□ 0.23
ARFGEF3Q5TH69 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.48■□□□□ 0.23
ARFGEF3Q5TH69 FAM207BP-201ENST00000447172 505 ntBASIC16.48■□□□□ 0.23
ARFGEF3Q5TH69 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.48■□□□□ 0.23
ARFGEF3Q5TH69 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.48■□□□□ 0.23
ARFGEF3Q5TH69 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.48■□□□□ 0.23
ARFGEF3Q5TH69 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.48■□□□□ 0.23
ARFGEF3Q5TH69 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ARFGEF3Q5TH69 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARFGEF3Q5TH69 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARFGEF3Q5TH69 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.48■□□□□ 0.23
ARFGEF3Q5TH69 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ARFGEF3Q5TH69 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARFGEF3Q5TH69 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
ARFGEF3Q5TH69 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.48■□□□□ 0.23
ARFGEF3Q5TH69 AC091390.4-202ENST00000476426 537 ntBASIC16.48■□□□□ 0.23
ARFGEF3Q5TH69 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
ARFGEF3Q5TH69 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.48■□□□□ 0.23
ARFGEF3Q5TH69 AP005242.2-201ENST00000580065 1175 ntBASIC16.48■□□□□ 0.23
ARFGEF3Q5TH69 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.48■□□□□ 0.23
ARFGEF3Q5TH69 LINC01465-201ENST00000408887 1940 ntBASIC16.48■□□□□ 0.23
ARFGEF3Q5TH69 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ARFGEF3Q5TH69 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARFGEF3Q5TH69 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARFGEF3Q5TH69 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.48■□□□□ 0.23
ARFGEF3Q5TH69 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ARFGEF3Q5TH69 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 ECEL1P2-202ENST00000465689 757 ntBASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms