Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CTC1Q2NKJ3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CTC1Q2NKJ3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.78■□□□□ 0.92
CTC1Q2NKJ3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.78■□□□□ 0.92
CTC1Q2NKJ3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.78■□□□□ 0.92
CTC1Q2NKJ3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CTC1Q2NKJ3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.78■□□□□ 0.92
CTC1Q2NKJ3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTC1Q2NKJ3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.77■□□□□ 0.92
CTC1Q2NKJ3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CTC1Q2NKJ3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTC1Q2NKJ3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
CTC1Q2NKJ3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.77■□□□□ 0.92
CTC1Q2NKJ3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CTC1Q2NKJ3 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTC1Q2NKJ3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTC1Q2NKJ3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.77■□□□□ 0.92
CTC1Q2NKJ3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
CTC1Q2NKJ3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.77■□□□□ 0.92
CTC1Q2NKJ3 AC092647.4-201ENST00000457211 535 ntBASIC20.77■□□□□ 0.92
CTC1Q2NKJ3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.77■□□□□ 0.92
CTC1Q2NKJ3 AC010653.2-201ENST00000623505 997 ntBASIC20.77■□□□□ 0.92
CTC1Q2NKJ3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTC1Q2NKJ3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.77■□□□□ 0.92
CTC1Q2NKJ3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTC1Q2NKJ3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.77■□□□□ 0.92
CTC1Q2NKJ3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.77■□□□□ 0.92
CTC1Q2NKJ3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.77■□□□□ 0.92
CTC1Q2NKJ3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
CTC1Q2NKJ3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CTC1Q2NKJ3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CTC1Q2NKJ3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.76■□□□□ 0.91
CTC1Q2NKJ3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CTC1Q2NKJ3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTC1Q2NKJ3 AFG3L1P-217ENST00000557444 2447 ntBASIC20.76■□□□□ 0.91
CTC1Q2NKJ3 AC096733.2-201ENST00000609937 1394 ntBASIC20.76■□□□□ 0.91
CTC1Q2NKJ3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTC1Q2NKJ3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTC1Q2NKJ3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CTC1Q2NKJ3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTC1Q2NKJ3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.76■□□□□ 0.91
CTC1Q2NKJ3 SLC25A1P2-201ENST00000430693 912 ntBASIC20.76■□□□□ 0.91
CTC1Q2NKJ3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.76■□□□□ 0.91
CTC1Q2NKJ3 AC008040.2-201ENST00000461049 708 ntBASIC20.76■□□□□ 0.91
CTC1Q2NKJ3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CTC1Q2NKJ3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.76■□□□□ 0.91
CTC1Q2NKJ3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.76■□□□□ 0.91
CTC1Q2NKJ3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.76■□□□□ 0.91
CTC1Q2NKJ3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.76■□□□□ 0.91
CTC1Q2NKJ3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.76■□□□□ 0.91
CTC1Q2NKJ3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.76■□□□□ 0.91
CTC1Q2NKJ3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.76■□□□□ 0.91
CTC1Q2NKJ3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.76■□□□□ 0.91
CTC1Q2NKJ3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.76■□□□□ 0.91
CTC1Q2NKJ3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTC1Q2NKJ3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTC1Q2NKJ3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CTC1Q2NKJ3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CTC1Q2NKJ3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CTC1Q2NKJ3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTC1Q2NKJ3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTC1Q2NKJ3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CTC1Q2NKJ3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CTC1Q2NKJ3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.75■□□□□ 0.91
CTC1Q2NKJ3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CTC1Q2NKJ3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTC1Q2NKJ3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CTC1Q2NKJ3 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.75■□□□□ 0.91
CTC1Q2NKJ3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CTC1Q2NKJ3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CTC1Q2NKJ3 CCR12P-201ENST00000446203 998 ntBASIC20.75■□□□□ 0.91
CTC1Q2NKJ3 KRT18P16-201ENST00000510337 1294 ntBASIC20.75■□□□□ 0.91
CTC1Q2NKJ3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CTC1Q2NKJ3 AC011558.1-201ENST00000623459 338 ntBASIC20.75■□□□□ 0.91
CTC1Q2NKJ3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CTC1Q2NKJ3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.75■□□□□ 0.91
CTC1Q2NKJ3 AC073314.1-201ENST00000568729 2216 ntBASIC20.75■□□□□ 0.91
CTC1Q2NKJ3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CTC1Q2NKJ3 KRT8P17-201ENST00000453110 1448 ntBASIC20.75■□□□□ 0.91
CTC1Q2NKJ3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CTC1Q2NKJ3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTC1Q2NKJ3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTC1Q2NKJ3 RCC2P6-201ENST00000526625 1557 ntBASIC20.75■□□□□ 0.91
CTC1Q2NKJ3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CTC1Q2NKJ3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CTC1Q2NKJ3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTC1Q2NKJ3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CTC1Q2NKJ3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CTC1Q2NKJ3 IER3-202ENST00000376377 1350 ntBASIC20.74■□□□□ 0.91
CTC1Q2NKJ3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTC1Q2NKJ3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTC1Q2NKJ3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTC1Q2NKJ3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CTC1Q2NKJ3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.74■□□□□ 0.91
CTC1Q2NKJ3 AC007663.1-201ENST00000438948 1240 ntBASIC20.74■□□□□ 0.91
CTC1Q2NKJ3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTC1Q2NKJ3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.74■□□□□ 0.91
CTC1Q2NKJ3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.74■□□□□ 0.91
CTC1Q2NKJ3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.74■□□□□ 0.91
CTC1Q2NKJ3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms