Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 HCG4P8-203ENST00000443049 980 ntBASIC18.48■□□□□ 0.55
GABREP78334 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.48■□□□□ 0.55
GABREP78334 Z85996.1-201ENST00000494644 937 ntBASIC18.48■□□□□ 0.55
GABREP78334 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GABREP78334 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.48■□□□□ 0.55
GABREP78334 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
GABREP78334 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.48■□□□□ 0.55
GABREP78334 AL353719.1-201ENST00000566847 864 ntBASIC18.48■□□□□ 0.55
GABREP78334 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.48■□□□□ 0.55
GABREP78334 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
GABREP78334 AL023973.1-201ENST00000624619 620 ntBASIC18.48■□□□□ 0.55
GABREP78334 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.48■□□□□ 0.55
GABREP78334 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
GABREP78334 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GABREP78334 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
GABREP78334 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GABREP78334 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
GABREP78334 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.47■□□□□ 0.55
GABREP78334 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.47■□□□□ 0.55
GABREP78334 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GABREP78334 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
GABREP78334 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GABREP78334 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GABREP78334 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GABREP78334 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GABREP78334 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.47■□□□□ 0.55
GABREP78334 AL450487.1-201ENST00000426799 995 ntBASIC18.47■□□□□ 0.55
GABREP78334 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GABREP78334 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GABREP78334 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
GABREP78334 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GABREP78334 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GABREP78334 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
GABREP78334 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
GABREP78334 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GABREP78334 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.47■□□□□ 0.55
GABREP78334 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
GABREP78334 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.46■□□□□ 0.55
GABREP78334 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GABREP78334 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
GABREP78334 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
GABREP78334 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.46■□□□□ 0.55
GABREP78334 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GABREP78334 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GABREP78334 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
GABREP78334 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GABREP78334 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GABREP78334 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GABREP78334 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.46■□□□□ 0.55
GABREP78334 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GABREP78334 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GABREP78334 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.46■□□□□ 0.55
GABREP78334 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.46■□□□□ 0.55
GABREP78334 AL441883.1-201ENST00000566170 1045 ntBASIC18.46■□□□□ 0.55
GABREP78334 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GABREP78334 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
GABREP78334 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GABREP78334 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GABREP78334 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GABREP78334 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.46■□□□□ 0.55
GABREP78334 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.46■□□□□ 0.54
GABREP78334 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
GABREP78334 TMEM179-206ENST00000616017 1645 ntBASIC18.45■□□□□ 0.54
GABREP78334 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GABREP78334 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GABREP78334 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GABREP78334 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
GABREP78334 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.45■□□□□ 0.54
GABREP78334 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
GABREP78334 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
GABREP78334 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.45■□□□□ 0.54
GABREP78334 AC026396.1-201ENST00000419388 421 ntBASIC18.45■□□□□ 0.54
GABREP78334 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GABREP78334 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.45■□□□□ 0.54
GABREP78334 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GABREP78334 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
GABREP78334 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.45■□□□□ 0.54
GABREP78334 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
GABREP78334 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.45■□□□□ 0.54
GABREP78334 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
GABREP78334 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GABREP78334 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GABREP78334 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.45■□□□□ 0.54
GABREP78334 AC005332.1-201ENST00000577698 1310 ntBASIC18.45■□□□□ 0.54
GABREP78334 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
GABREP78334 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.45■□□□□ 0.54
GABREP78334 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
GABREP78334 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
GABREP78334 AC092720.2-201ENST00000602388 1665 ntBASIC18.44■□□□□ 0.54
GABREP78334 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GABREP78334 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
GABREP78334 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
GABREP78334 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
GABREP78334 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GABREP78334 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.44■□□□□ 0.54
GABREP78334 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.44■□□□□ 0.54
GABREP78334 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.44■□□□□ 0.54
GABREP78334 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
GABREP78334 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.44■□□□□ 0.54
GABREP78334 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms