Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.95■□□□□ 0.62
YBX1P67809 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.95■□□□□ 0.62
YBX1P67809 AC142381.4-202ENST00000563973 229 ntBASIC18.95■□□□□ 0.62
YBX1P67809 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.95■□□□□ 0.62
YBX1P67809 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
YBX1P67809 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
YBX1P67809 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
YBX1P67809 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
YBX1P67809 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
YBX1P67809 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
YBX1P67809 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.95■□□□□ 0.62
YBX1P67809 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
YBX1P67809 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
YBX1P67809 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
YBX1P67809 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
YBX1P67809 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
YBX1P67809 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.95■□□□□ 0.62
YBX1P67809 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
YBX1P67809 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
YBX1P67809 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
YBX1P67809 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
YBX1P67809 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
YBX1P67809 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.94■□□□□ 0.62
YBX1P67809 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
YBX1P67809 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.94■□□□□ 0.62
YBX1P67809 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
YBX1P67809 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
YBX1P67809 AC239809.2-201ENST00000415381 517 ntBASIC18.94■□□□□ 0.62
YBX1P67809 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
YBX1P67809 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.94■□□□□ 0.62
YBX1P67809 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.94■□□□□ 0.62
YBX1P67809 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.94■□□□□ 0.62
YBX1P67809 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.94■□□□□ 0.62
YBX1P67809 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
YBX1P67809 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
YBX1P67809 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
YBX1P67809 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
YBX1P67809 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
YBX1P67809 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
YBX1P67809 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
YBX1P67809 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
YBX1P67809 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
YBX1P67809 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
YBX1P67809 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
YBX1P67809 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
YBX1P67809 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
YBX1P67809 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
YBX1P67809 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
YBX1P67809 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
YBX1P67809 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
YBX1P67809 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
YBX1P67809 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
YBX1P67809 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
YBX1P67809 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
YBX1P67809 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
YBX1P67809 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
YBX1P67809 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.93■□□□□ 0.62
YBX1P67809 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.93■□□□□ 0.62
YBX1P67809 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.93■□□□□ 0.62
YBX1P67809 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.93■□□□□ 0.62
YBX1P67809 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.93■□□□□ 0.62
YBX1P67809 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.93■□□□□ 0.62
YBX1P67809 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
YBX1P67809 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.93■□□□□ 0.62
YBX1P67809 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.93■□□□□ 0.62
YBX1P67809 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
YBX1P67809 AP006587.1-201ENST00000534129 1502 ntBASIC18.93■□□□□ 0.62
YBX1P67809 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
YBX1P67809 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.93■□□□□ 0.62
YBX1P67809 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
YBX1P67809 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
YBX1P67809 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
YBX1P67809 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.92■□□□□ 0.62
YBX1P67809 Z82202.1-201ENST00000623446 1880 ntBASIC18.92■□□□□ 0.62
YBX1P67809 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.92■□□□□ 0.62
YBX1P67809 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
YBX1P67809 NEFHP1-201ENST00000412845 2629 ntBASIC18.92■□□□□ 0.62
YBX1P67809 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.92■□□□□ 0.62
YBX1P67809 NBPF21P-201ENST00000425093 1451 ntBASIC18.92■□□□□ 0.62
YBX1P67809 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.92■□□□□ 0.62
YBX1P67809 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
YBX1P67809 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.92■□□□□ 0.62
YBX1P67809 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
YBX1P67809 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
YBX1P67809 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.92■□□□□ 0.62
YBX1P67809 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.92■□□□□ 0.62
YBX1P67809 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.92■□□□□ 0.62
YBX1P67809 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.92■□□□□ 0.62
YBX1P67809 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
YBX1P67809 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.92■□□□□ 0.62
YBX1P67809 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
YBX1P67809 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
YBX1P67809 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.92■□□□□ 0.62
YBX1P67809 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
YBX1P67809 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
YBX1P67809 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.92■□□□□ 0.62
YBX1P67809 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
YBX1P67809 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
YBX1P67809 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
YBX1P67809 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms