Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC42P60953 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.76■□□□□ 0.43
CDC42P60953 AC005837.3-201ENST00000612163 286 ntBASIC17.76■□□□□ 0.43
CDC42P60953 MYCNOS-205ENST00000641950 531 ntBASIC17.76■□□□□ 0.43
CDC42P60953 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC42P60953 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.76■□□□□ 0.43
CDC42P60953 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC42P60953 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CDC42P60953 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC42P60953 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.75■□□□□ 0.43
CDC42P60953 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC42P60953 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC42P60953 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC42P60953 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC42P60953 AC141586.3-201ENST00000562166 1838 ntBASIC17.75■□□□□ 0.43
CDC42P60953 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDC42P60953 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDC42P60953 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDC42P60953 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.75■□□□□ 0.43
CDC42P60953 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
CDC42P60953 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CDC42P60953 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC42P60953 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDC42P60953 TERF1P5-201ENST00000477545 1207 ntBASIC17.75■□□□□ 0.43
CDC42P60953 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.75■□□□□ 0.43
CDC42P60953 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.75■□□□□ 0.43
CDC42P60953 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDC42P60953 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.75■□□□□ 0.43
CDC42P60953 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDC42P60953 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDC42P60953 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC42P60953 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC42P60953 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDC42P60953 AC104581.1-202ENST00000635932 2618 ntBASIC17.75■□□□□ 0.43
CDC42P60953 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDC42P60953 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDC42P60953 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC42P60953 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDC42P60953 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC42P60953 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.75■□□□□ 0.43
CDC42P60953 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42P60953 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42P60953 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42P60953 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42P60953 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.74■□□□□ 0.43
CDC42P60953 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42P60953 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42P60953 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42P60953 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42P60953 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42P60953 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42P60953 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42P60953 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.74■□□□□ 0.43
CDC42P60953 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CDC42P60953 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CDC42P60953 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42P60953 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42P60953 MCRIP2P1-201ENST00000394346 511 ntBASIC17.74■□□□□ 0.43
CDC42P60953 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.74■□□□□ 0.43
CDC42P60953 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42P60953 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42P60953 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CDC42P60953 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42P60953 AC009113.1-201ENST00000570267 2443 ntBASIC17.74■□□□□ 0.43
CDC42P60953 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42P60953 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42P60953 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.74■□□□□ 0.43
CDC42P60953 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42P60953 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42P60953 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.74■□□□□ 0.43
CDC42P60953 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42P60953 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.74■□□□□ 0.43
CDC42P60953 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42P60953 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.74■□□□□ 0.43
CDC42P60953 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CDC42P60953 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.74■□□□□ 0.43
CDC42P60953 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42P60953 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42P60953 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42P60953 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42P60953 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42P60953 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42P60953 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDC42P60953 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC42P60953 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC42P60953 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDC42P60953 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.73■□□□□ 0.43
CDC42P60953 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDC42P60953 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC42P60953 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC42P60953 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC42P60953 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC42P60953 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC42P60953 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDC42P60953 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.73■□□□□ 0.43
CDC42P60953 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC42P60953 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC42P60953 KRT18P14-201ENST00000534205 1250 ntBASIC17.73■□□□□ 0.43
CDC42P60953 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC42P60953 MFSD11-216ENST00000590393 1141 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms