Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDH8P55286 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH8P55286 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CDH8P55286 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH8P55286 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDH8P55286 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CDH8P55286 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH8P55286 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.76■□□□□ 0.91
CDH8P55286 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH8P55286 MIR718-201ENST00000390190 70 ntBASIC20.76■□□□□ 0.91
CDH8P55286 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CDH8P55286 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH8P55286 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDH8P55286 AC073195.1-201ENST00000607241 877 ntBASIC20.76■□□□□ 0.91
CDH8P55286 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.76■□□□□ 0.91
CDH8P55286 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH8P55286 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.76■□□□□ 0.91
CDH8P55286 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
CDH8P55286 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDH8P55286 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH8P55286 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CDH8P55286 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH8P55286 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.76■□□□□ 0.91
CDH8P55286 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH8P55286 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.75■□□□□ 0.91
CDH8P55286 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.75■□□□□ 0.91
CDH8P55286 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CDH8P55286 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH8P55286 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH8P55286 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH8P55286 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
CDH8P55286 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.75■□□□□ 0.91
CDH8P55286 KSR1P1-201ENST00000446298 240 ntBASIC20.75■□□□□ 0.91
CDH8P55286 SNORA78-201ENST00000459373 127 ntBASIC20.75■□□□□ 0.91
CDH8P55286 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.75■□□□□ 0.91
CDH8P55286 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.75■□□□□ 0.91
CDH8P55286 CD177P1-201ENST00000606252 935 ntBASIC20.75■□□□□ 0.91
CDH8P55286 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.75■□□□□ 0.91
CDH8P55286 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH8P55286 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDH8P55286 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CDH8P55286 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CDH8P55286 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH8P55286 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH8P55286 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.74■□□□□ 0.91
CDH8P55286 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH8P55286 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CDH8P55286 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH8P55286 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
CDH8P55286 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH8P55286 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH8P55286 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH8P55286 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.74■□□□□ 0.91
CDH8P55286 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.74■□□□□ 0.91
CDH8P55286 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.74■□□□□ 0.91
CDH8P55286 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.74■□□□□ 0.91
CDH8P55286 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.74■□□□□ 0.91
CDH8P55286 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CDH8P55286 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.74■□□□□ 0.91
CDH8P55286 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.74■□□□□ 0.91
CDH8P55286 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CDH8P55286 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDH8P55286 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.74■□□□□ 0.91
CDH8P55286 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.74■□□□□ 0.91
CDH8P55286 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH8P55286 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDH8P55286 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.73■□□□□ 0.91
CDH8P55286 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH8P55286 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH8P55286 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.73■□□□□ 0.91
CDH8P55286 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH8P55286 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH8P55286 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CDH8P55286 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH8P55286 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH8P55286 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH8P55286 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CDH8P55286 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.73■□□□□ 0.91
CDH8P55286 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CDH8P55286 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH8P55286 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH8P55286 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.73■□□□□ 0.91
CDH8P55286 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.73■□□□□ 0.91
CDH8P55286 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.73■□□□□ 0.91
CDH8P55286 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH8P55286 AL445675.2-201ENST00000620291 557 ntBASIC20.73■□□□□ 0.91
CDH8P55286 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH8P55286 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH8P55286 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.73■□□□□ 0.91
CDH8P55286 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH8P55286 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH8P55286 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH8P55286 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDH8P55286 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CDH8P55286 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.72■□□□□ 0.91
CDH8P55286 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.72■□□□□ 0.91
CDH8P55286 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH8P55286 KRT16P1-201ENST00000399124 1418 ntBASIC20.72■□□□□ 0.91
CDH8P55286 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH8P55286 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms