Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HMGCS2P54868 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HMGCS2P54868 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
HMGCS2P54868 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HMGCS2P54868 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HMGCS2P54868 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC22.46■■□□□ 1.19
HMGCS2P54868 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC22.46■■□□□ 1.19
HMGCS2P54868 PCED1CP-201ENST00000419887 785 ntBASIC22.46■■□□□ 1.19
HMGCS2P54868 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC22.46■■□□□ 1.19
HMGCS2P54868 FAM86EP-206ENST00000510506 987 ntBASIC22.46■■□□□ 1.19
HMGCS2P54868 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
HMGCS2P54868 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC22.46■■□□□ 1.19
HMGCS2P54868 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC22.46■■□□□ 1.19
HMGCS2P54868 AC140113.3-201ENST00000605663 199 ntBASIC22.46■■□□□ 1.19
HMGCS2P54868 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC22.46■■□□□ 1.19
HMGCS2P54868 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC22.46■■□□□ 1.19
HMGCS2P54868 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
HMGCS2P54868 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HMGCS2P54868 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HMGCS2P54868 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
HMGCS2P54868 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
HMGCS2P54868 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HMGCS2P54868 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
HMGCS2P54868 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
HMGCS2P54868 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
HMGCS2P54868 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
HMGCS2P54868 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
HMGCS2P54868 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC22.45■■□□□ 1.18
HMGCS2P54868 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HMGCS2P54868 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HMGCS2P54868 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HMGCS2P54868 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC22.45■■□□□ 1.18
HMGCS2P54868 HOMER2P1-201ENST00000455653 964 ntBASIC22.45■■□□□ 1.18
HMGCS2P54868 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC22.45■■□□□ 1.18
HMGCS2P54868 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC22.45■■□□□ 1.18
HMGCS2P54868 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC22.45■■□□□ 1.18
HMGCS2P54868 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC22.45■■□□□ 1.18
HMGCS2P54868 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC22.45■■□□□ 1.18
HMGCS2P54868 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HMGCS2P54868 AL121956.5-201ENST00000625261 221 ntBASIC22.45■■□□□ 1.18
HMGCS2P54868 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC22.45■■□□□ 1.18
HMGCS2P54868 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC22.45■■□□□ 1.18
HMGCS2P54868 KRT8P45-201ENST00000414328 1447 ntBASIC22.45■■□□□ 1.18
HMGCS2P54868 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
HMGCS2P54868 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HMGCS2P54868 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC22.45■■□□□ 1.18
HMGCS2P54868 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HMGCS2P54868 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
HMGCS2P54868 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
HMGCS2P54868 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC22.45■■□□□ 1.18
HMGCS2P54868 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
HMGCS2P54868 AL512408.1-201ENST00000569378 2000 ntBASIC22.45■■□□□ 1.18
HMGCS2P54868 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HMGCS2P54868 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.45■■□□□ 1.18
HMGCS2P54868 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HMGCS2P54868 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HMGCS2P54868 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HMGCS2P54868 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
HMGCS2P54868 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
HMGCS2P54868 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
HMGCS2P54868 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
HMGCS2P54868 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HMGCS2P54868 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
HMGCS2P54868 AC009947.2-201ENST00000444014 672 ntBASIC22.44■■□□□ 1.18
HMGCS2P54868 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
HMGCS2P54868 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC22.44■■□□□ 1.18
HMGCS2P54868 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC22.44■■□□□ 1.18
HMGCS2P54868 AC007375.3-201ENST00000600936 2314 ntBASIC22.44■■□□□ 1.18
HMGCS2P54868 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC22.44■■□□□ 1.18
HMGCS2P54868 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
HMGCS2P54868 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC22.44■■□□□ 1.18
HMGCS2P54868 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC22.44■■□□□ 1.18
HMGCS2P54868 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.44■■□□□ 1.18
HMGCS2P54868 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
HMGCS2P54868 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
HMGCS2P54868 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
HMGCS2P54868 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC22.43■■□□□ 1.18
HMGCS2P54868 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC22.43■■□□□ 1.18
HMGCS2P54868 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC22.43■■□□□ 1.18
HMGCS2P54868 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HMGCS2P54868 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC22.43■■□□□ 1.18
HMGCS2P54868 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC22.43■■□□□ 1.18
HMGCS2P54868 AL391422.3-201ENST00000603791 2761 ntBASIC22.43■■□□□ 1.18
HMGCS2P54868 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
HMGCS2P54868 AL671277.2-201ENST00000458060 996 ntBASIC22.43■■□□□ 1.18
HMGCS2P54868 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC22.43■■□□□ 1.18
HMGCS2P54868 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC22.43■■□□□ 1.18
HMGCS2P54868 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC22.43■■□□□ 1.18
HMGCS2P54868 KRT18P56-201ENST00000507275 550 ntBASIC22.43■■□□□ 1.18
HMGCS2P54868 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC22.43■■□□□ 1.18
HMGCS2P54868 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC22.43■■□□□ 1.18
HMGCS2P54868 ETFA-216ENST00000560726 942 ntTSL 3 BASIC22.43■■□□□ 1.18
HMGCS2P54868 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
HMGCS2P54868 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HMGCS2P54868 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HMGCS2P54868 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HMGCS2P54868 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HMGCS2P54868 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
HMGCS2P54868 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.42■■□□□ 1.18
HMGCS2P54868 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms