Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.77■□□□□ 0.92
RAD23BP54727 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
RAD23BP54727 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.77■□□□□ 0.92
RAD23BP54727 C1QL1P1-201ENST00000568105 661 ntBASIC20.77■□□□□ 0.92
RAD23BP54727 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.77■□□□□ 0.92
RAD23BP54727 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
RAD23BP54727 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.77■□□□□ 0.92
RAD23BP54727 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAD23BP54727 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RAD23BP54727 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.77■□□□□ 0.92
RAD23BP54727 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.77■□□□□ 0.91
RAD23BP54727 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RAD23BP54727 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.77■□□□□ 0.91
RAD23BP54727 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAD23BP54727 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAD23BP54727 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAD23BP54727 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.76■□□□□ 0.91
RAD23BP54727 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAD23BP54727 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAD23BP54727 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAD23BP54727 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAD23BP54727 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAD23BP54727 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAD23BP54727 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
RAD23BP54727 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAD23BP54727 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAD23BP54727 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAD23BP54727 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAD23BP54727 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.76■□□□□ 0.91
RAD23BP54727 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.76■□□□□ 0.91
RAD23BP54727 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.76■□□□□ 0.91
RAD23BP54727 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.76■□□□□ 0.91
RAD23BP54727 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RAD23BP54727 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAD23BP54727 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.76■□□□□ 0.91
RAD23BP54727 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RAD23BP54727 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.75■□□□□ 0.91
RAD23BP54727 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAD23BP54727 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAD23BP54727 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RAD23BP54727 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.75■□□□□ 0.91
RAD23BP54727 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.75■□□□□ 0.91
RAD23BP54727 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAD23BP54727 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RAD23BP54727 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.75■□□□□ 0.91
RAD23BP54727 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAD23BP54727 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RAD23BP54727 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAD23BP54727 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RAD23BP54727 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAD23BP54727 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAD23BP54727 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAD23BP54727 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAD23BP54727 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAD23BP54727 AL020996.1-203ENST00000536896 2307 ntBASIC20.75■□□□□ 0.91
RAD23BP54727 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAD23BP54727 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAD23BP54727 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RAD23BP54727 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.74■□□□□ 0.91
RAD23BP54727 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.74■□□□□ 0.91
RAD23BP54727 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAD23BP54727 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.74■□□□□ 0.91
RAD23BP54727 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RAD23BP54727 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAD23BP54727 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAD23BP54727 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAD23BP54727 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RAD23BP54727 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAD23BP54727 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAD23BP54727 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.74■□□□□ 0.91
RAD23BP54727 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.74■□□□□ 0.91
RAD23BP54727 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
RAD23BP54727 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RAD23BP54727 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
RAD23BP54727 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAD23BP54727 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.73■□□□□ 0.91
RAD23BP54727 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAD23BP54727 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAD23BP54727 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
RAD23BP54727 AC087289.5-201ENST00000586076 3175 ntBASIC20.73■□□□□ 0.91
RAD23BP54727 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.73■□□□□ 0.91
RAD23BP54727 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAD23BP54727 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAD23BP54727 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.73■□□□□ 0.91
RAD23BP54727 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAD23BP54727 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAD23BP54727 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.73■□□□□ 0.91
RAD23BP54727 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.73■□□□□ 0.91
RAD23BP54727 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
RAD23BP54727 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.73■□□□□ 0.91
RAD23BP54727 UBE2SP1-201ENST00000450587 669 ntBASIC20.73■□□□□ 0.91
RAD23BP54727 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAD23BP54727 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.73■□□□□ 0.91
RAD23BP54727 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAD23BP54727 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.73■□□□□ 0.91
RAD23BP54727 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.73■□□□□ 0.91
RAD23BP54727 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAD23BP54727 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.73■□□□□ 0.91
RAD23BP54727 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.73■□□□□ 0.91
RAD23BP54727 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms