Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.58■□□□□ 0.72
LIMK2P53671 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LIMK2P53671 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LIMK2P53671 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
LIMK2P53671 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LIMK2P53671 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LIMK2P53671 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.58■□□□□ 0.72
LIMK2P53671 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.58■□□□□ 0.72
LIMK2P53671 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LIMK2P53671 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LIMK2P53671 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LIMK2P53671 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.58■□□□□ 0.72
LIMK2P53671 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LIMK2P53671 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LIMK2P53671 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LIMK2P53671 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LIMK2P53671 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
LIMK2P53671 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LIMK2P53671 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LIMK2P53671 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LIMK2P53671 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LIMK2P53671 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LIMK2P53671 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LIMK2P53671 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.57■□□□□ 0.72
LIMK2P53671 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.57■□□□□ 0.72
LIMK2P53671 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
LIMK2P53671 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.57■□□□□ 0.72
LIMK2P53671 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.57■□□□□ 0.72
LIMK2P53671 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LIMK2P53671 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.57■□□□□ 0.72
LIMK2P53671 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LIMK2P53671 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LIMK2P53671 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.57■□□□□ 0.72
LIMK2P53671 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LIMK2P53671 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LIMK2P53671 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LIMK2P53671 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.57■□□□□ 0.72
LIMK2P53671 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.56■□□□□ 0.72
LIMK2P53671 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LIMK2P53671 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
LIMK2P53671 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.56■□□□□ 0.72
LIMK2P53671 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
LIMK2P53671 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LIMK2P53671 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
LIMK2P53671 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LIMK2P53671 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
LIMK2P53671 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LIMK2P53671 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LIMK2P53671 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LIMK2P53671 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LIMK2P53671 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
LIMK2P53671 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LIMK2P53671 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
LIMK2P53671 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.56■□□□□ 0.72
LIMK2P53671 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.56■□□□□ 0.72
LIMK2P53671 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.56■□□□□ 0.72
LIMK2P53671 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
LIMK2P53671 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
LIMK2P53671 AC004408.2-201ENST00000623613 2777 ntBASIC19.56■□□□□ 0.72
LIMK2P53671 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.56■□□□□ 0.72
LIMK2P53671 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LIMK2P53671 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.56■□□□□ 0.72
LIMK2P53671 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LIMK2P53671 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LIMK2P53671 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
LIMK2P53671 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIMK2P53671 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIMK2P53671 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
LIMK2P53671 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIMK2P53671 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
LIMK2P53671 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.55■□□□□ 0.72
LIMK2P53671 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIMK2P53671 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIMK2P53671 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LIMK2P53671 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LIMK2P53671 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.55■□□□□ 0.72
LIMK2P53671 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIMK2P53671 MIR718-201ENST00000390190 70 ntBASIC19.55■□□□□ 0.72
LIMK2P53671 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.55■□□□□ 0.72
LIMK2P53671 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.55■□□□□ 0.72
LIMK2P53671 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIMK2P53671 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.55■□□□□ 0.72
LIMK2P53671 AC005829.2-201ENST00000571422 1056 ntBASIC19.55■□□□□ 0.72
LIMK2P53671 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.55■□□□□ 0.72
LIMK2P53671 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.55■□□□□ 0.72
LIMK2P53671 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.55■□□□□ 0.72
LIMK2P53671 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LIMK2P53671 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.55■□□□□ 0.72
LIMK2P53671 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIMK2P53671 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.55■□□□□ 0.72
LIMK2P53671 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.55■□□□□ 0.72
LIMK2P53671 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIMK2P53671 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.55■□□□□ 0.72
LIMK2P53671 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LIMK2P53671 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIMK2P53671 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LIMK2P53671 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LIMK2P53671 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LIMK2P53671 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
LIMK2P53671 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms