Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGA2P52926 LSM12P1-201ENST00000411836 588 ntBASIC17.74■□□□□ 0.43
HMGA2P52926 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.74■□□□□ 0.43
HMGA2P52926 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.74■□□□□ 0.43
HMGA2P52926 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.74■□□□□ 0.43
HMGA2P52926 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.74■□□□□ 0.43
HMGA2P52926 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HMGA2P52926 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGA2P52926 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGA2P52926 WIZP1-201ENST00000531444 2299 ntBASIC17.74■□□□□ 0.43
HMGA2P52926 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.74■□□□□ 0.43
HMGA2P52926 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HMGA2P52926 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGA2P52926 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGA2P52926 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.74■□□□□ 0.43
HMGA2P52926 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.73■□□□□ 0.43
HMGA2P52926 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.73■□□□□ 0.43
HMGA2P52926 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.73■□□□□ 0.43
HMGA2P52926 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.73■□□□□ 0.43
HMGA2P52926 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HMGA2P52926 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.73■□□□□ 0.43
HMGA2P52926 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HMGA2P52926 SDHAP1-207ENST00000440850 2000 ntBASIC17.73■□□□□ 0.43
HMGA2P52926 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGA2P52926 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGA2P52926 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGA2P52926 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.73■□□□□ 0.43
HMGA2P52926 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
HMGA2P52926 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.73■□□□□ 0.43
HMGA2P52926 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HMGA2P52926 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HMGA2P52926 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGA2P52926 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGA2P52926 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HMGA2P52926 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.73■□□□□ 0.43
HMGA2P52926 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGA2P52926 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
HMGA2P52926 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.72■□□□□ 0.43
HMGA2P52926 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.72■□□□□ 0.43
HMGA2P52926 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGA2P52926 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGA2P52926 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGA2P52926 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.72■□□□□ 0.43
HMGA2P52926 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMGA2P52926 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGA2P52926 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.72■□□□□ 0.43
HMGA2P52926 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGA2P52926 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.72■□□□□ 0.43
HMGA2P52926 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.72■□□□□ 0.43
HMGA2P52926 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
HMGA2P52926 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGA2P52926 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMGA2P52926 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.72■□□□□ 0.43
HMGA2P52926 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.72■□□□□ 0.43
HMGA2P52926 AC005829.2-201ENST00000571422 1056 ntBASIC17.72■□□□□ 0.43
HMGA2P52926 AC133552.2-202ENST00000575694 574 ntBASIC17.72■□□□□ 0.43
HMGA2P52926 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.72■□□□□ 0.43
HMGA2P52926 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGA2P52926 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HMGA2P52926 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMGA2P52926 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.72■□□□□ 0.43
HMGA2P52926 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGA2P52926 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HMGA2P52926 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.72■□□□□ 0.43
HMGA2P52926 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGA2P52926 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HMGA2P52926 AL512353.2-201ENST00000448759 1962 ntBASIC17.71■□□□□ 0.43
HMGA2P52926 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.71■□□□□ 0.43
HMGA2P52926 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.71■□□□□ 0.43
HMGA2P52926 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGA2P52926 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGA2P52926 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGA2P52926 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HMGA2P52926 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.71■□□□□ 0.43
HMGA2P52926 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.71■□□□□ 0.43
HMGA2P52926 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGA2P52926 IRX1P1-201ENST00000438849 1838 ntBASIC17.71■□□□□ 0.43
HMGA2P52926 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HMGA2P52926 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.71■□□□□ 0.43
HMGA2P52926 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGA2P52926 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HMGA2P52926 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.71■□□□□ 0.43
HMGA2P52926 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HMGA2P52926 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGA2P52926 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.71■□□□□ 0.43
HMGA2P52926 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.71■□□□□ 0.43
HMGA2P52926 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
HMGA2P52926 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.71■□□□□ 0.43
HMGA2P52926 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.71■□□□□ 0.43
HMGA2P52926 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HMGA2P52926 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGA2P52926 AL390961.4-201ENST00000623958 2535 ntBASIC17.71■□□□□ 0.43
HMGA2P52926 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.71■□□□□ 0.43
HMGA2P52926 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGA2P52926 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
HMGA2P52926 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.71■□□□□ 0.42
HMGA2P52926 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
HMGA2P52926 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
HMGA2P52926 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.71■□□□□ 0.42
HMGA2P52926 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms