Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.58■□□□□ 0.56
POLR2JP52435 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
POLR2JP52435 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.58■□□□□ 0.56
POLR2JP52435 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
POLR2JP52435 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
POLR2JP52435 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
POLR2JP52435 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
POLR2JP52435 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLR2JP52435 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
POLR2JP52435 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.57■□□□□ 0.56
POLR2JP52435 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
POLR2JP52435 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLR2JP52435 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.57■□□□□ 0.56
POLR2JP52435 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLR2JP52435 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLR2JP52435 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLR2JP52435 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.57■□□□□ 0.56
POLR2JP52435 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.57■□□□□ 0.56
POLR2JP52435 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
POLR2JP52435 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
POLR2JP52435 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.57■□□□□ 0.56
POLR2JP52435 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
POLR2JP52435 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.57■□□□□ 0.56
POLR2JP52435 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.57■□□□□ 0.56
POLR2JP52435 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.57■□□□□ 0.56
POLR2JP52435 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.57■□□□□ 0.56
POLR2JP52435 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.57■□□□□ 0.56
POLR2JP52435 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLR2JP52435 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
POLR2JP52435 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLR2JP52435 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.57■□□□□ 0.56
POLR2JP52435 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLR2JP52435 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLR2JP52435 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.57■□□□□ 0.56
POLR2JP52435 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLR2JP52435 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.57■□□□□ 0.56
POLR2JP52435 ZNF815P-204ENST00000434898 1737 ntBASIC18.57■□□□□ 0.56
POLR2JP52435 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.57■□□□□ 0.56
POLR2JP52435 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLR2JP52435 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLR2JP52435 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
POLR2JP52435 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
POLR2JP52435 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.56■□□□□ 0.56
POLR2JP52435 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.56■□□□□ 0.56
POLR2JP52435 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
POLR2JP52435 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
POLR2JP52435 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
POLR2JP52435 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLR2JP52435 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
POLR2JP52435 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
POLR2JP52435 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.56■□□□□ 0.56
POLR2JP52435 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLR2JP52435 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
POLR2JP52435 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.56■□□□□ 0.56
POLR2JP52435 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLR2JP52435 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
POLR2JP52435 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLR2JP52435 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLR2JP52435 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.56■□□□□ 0.56
POLR2JP52435 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLR2JP52435 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLR2JP52435 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLR2JP52435 AC020763.4-201ENST00000623414 4170 ntBASIC18.56■□□□□ 0.56
POLR2JP52435 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
POLR2JP52435 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
POLR2JP52435 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.55■□□□□ 0.56
POLR2JP52435 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.55■□□□□ 0.56
POLR2JP52435 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2JP52435 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
POLR2JP52435 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
POLR2JP52435 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2JP52435 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2JP52435 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2JP52435 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2JP52435 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2JP52435 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2JP52435 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2JP52435 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2JP52435 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
POLR2JP52435 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.55■□□□□ 0.56
POLR2JP52435 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
POLR2JP52435 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2JP52435 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2JP52435 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2JP52435 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2JP52435 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2JP52435 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2JP52435 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2JP52435 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2JP52435 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
POLR2JP52435 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2JP52435 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2JP52435 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
POLR2JP52435 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2JP52435 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
POLR2JP52435 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
POLR2JP52435 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
POLR2JP52435 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2JP52435 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.54■□□□□ 0.56
POLR2JP52435 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms