Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
NEK3P51956 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.02■□□□□ 0.79
NEK3P51956 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
NEK3P51956 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.02■□□□□ 0.79
NEK3P51956 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NEK3P51956 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
NEK3P51956 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
NEK3P51956 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NEK3P51956 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NEK3P51956 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NEK3P51956 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NEK3P51956 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NEK3P51956 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.01■□□□□ 0.79
NEK3P51956 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.01■□□□□ 0.79
NEK3P51956 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
NEK3P51956 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
NEK3P51956 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.01■□□□□ 0.79
NEK3P51956 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NEK3P51956 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NEK3P51956 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20■□□□□ 0.79
NEK3P51956 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20■□□□□ 0.79
NEK3P51956 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
NEK3P51956 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20■□□□□ 0.79
NEK3P51956 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
NEK3P51956 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NEK3P51956 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20■□□□□ 0.79
NEK3P51956 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20■□□□□ 0.79
NEK3P51956 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
NEK3P51956 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NEK3P51956 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20■□□□□ 0.79
NEK3P51956 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NEK3P51956 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20■□□□□ 0.79
NEK3P51956 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20■□□□□ 0.79
NEK3P51956 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20■□□□□ 0.79
NEK3P51956 PNN-205ENST00000556530 601 ntTSL 2 BASIC20■□□□□ 0.79
NEK3P51956 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20■□□□□ 0.79
NEK3P51956 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20■□□□□ 0.79
NEK3P51956 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NEK3P51956 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20■□□□□ 0.79
NEK3P51956 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NEK3P51956 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NEK3P51956 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20■□□□□ 0.79
NEK3P51956 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
NEK3P51956 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NEK3P51956 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NEK3P51956 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20■□□□□ 0.79
NEK3P51956 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.99■□□□□ 0.79
NEK3P51956 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NEK3P51956 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.99■□□□□ 0.79
NEK3P51956 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
NEK3P51956 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
NEK3P51956 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.99■□□□□ 0.79
NEK3P51956 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.99■□□□□ 0.79
NEK3P51956 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.99■□□□□ 0.79
NEK3P51956 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.99■□□□□ 0.79
NEK3P51956 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NEK3P51956 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.99■□□□□ 0.79
NEK3P51956 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NEK3P51956 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NEK3P51956 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NEK3P51956 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.99■□□□□ 0.79
NEK3P51956 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.99■□□□□ 0.79
NEK3P51956 AC004408.2-201ENST00000623613 2777 ntBASIC19.99■□□□□ 0.79
NEK3P51956 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.99■□□□□ 0.79
NEK3P51956 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NEK3P51956 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NEK3P51956 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NEK3P51956 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NEK3P51956 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
NEK3P51956 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.98■□□□□ 0.79
NEK3P51956 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.98■□□□□ 0.79
NEK3P51956 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.98■□□□□ 0.79
NEK3P51956 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.98■□□□□ 0.79
NEK3P51956 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NEK3P51956 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NEK3P51956 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
NEK3P51956 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.98■□□□□ 0.79
NEK3P51956 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.98■□□□□ 0.79
NEK3P51956 AL596275.1-201ENST00000423464 877 ntBASIC19.98■□□□□ 0.79
NEK3P51956 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.98■□□□□ 0.79
NEK3P51956 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.98■□□□□ 0.79
NEK3P51956 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.98■□□□□ 0.79
NEK3P51956 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.98■□□□□ 0.79
NEK3P51956 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.98■□□□□ 0.79
NEK3P51956 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.98■□□□□ 0.79
NEK3P51956 Z99916.2-201ENST00000604037 246 ntBASIC19.98■□□□□ 0.79
NEK3P51956 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NEK3P51956 KRT16P6-202ENST00000425692 1426 ntBASIC19.98■□□□□ 0.79
NEK3P51956 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NEK3P51956 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.98■□□□□ 0.79
NEK3P51956 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NEK3P51956 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NEK3P51956 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.98■□□□□ 0.79
NEK3P51956 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
NEK3P51956 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NEK3P51956 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NEK3P51956 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.97■□□□□ 0.79
NEK3P51956 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NEK3P51956 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
NEK3P51956 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms