Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
BRCA2P51587 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
BRCA2P51587 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
BRCA2P51587 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.8■■□□□ 1.08
BRCA2P51587 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
BRCA2P51587 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
BRCA2P51587 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
BRCA2P51587 FAAHP1-202ENST00000446499 1238 ntBASIC21.8■■□□□ 1.08
BRCA2P51587 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
BRCA2P51587 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.8■■□□□ 1.08
BRCA2P51587 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
BRCA2P51587 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
BRCA2P51587 BX119927.1-201ENST00000636596 1552 ntBASIC21.8■■□□□ 1.08
BRCA2P51587 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
BRCA2P51587 AC004870.1-201ENST00000315132 882 ntBASIC21.8■■□□□ 1.08
BRCA2P51587 LINC02084-201ENST00000606069 1096 ntBASIC21.8■■□□□ 1.08
BRCA2P51587 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
BRCA2P51587 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
BRCA2P51587 AC016734.2-201ENST00000624325 1377 ntBASIC21.8■■□□□ 1.08
BRCA2P51587 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.79■■□□□ 1.08
BRCA2P51587 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
BRCA2P51587 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
BRCA2P51587 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BRCA2P51587 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
BRCA2P51587 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.79■■□□□ 1.08
BRCA2P51587 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.79■■□□□ 1.08
BRCA2P51587 NME4-212ENST00000621774 904 ntTSL 3 BASIC21.79■■□□□ 1.08
BRCA2P51587 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.79■■□□□ 1.08
BRCA2P51587 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.79■■□□□ 1.08
BRCA2P51587 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.79■■□□□ 1.08
BRCA2P51587 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BRCA2P51587 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.79■■□□□ 1.08
BRCA2P51587 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC21.78■■□□□ 1.08
BRCA2P51587 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.78■■□□□ 1.08
BRCA2P51587 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.78■■□□□ 1.08
BRCA2P51587 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.78■■□□□ 1.08
BRCA2P51587 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC21.78■■□□□ 1.08
BRCA2P51587 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
BRCA2P51587 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
BRCA2P51587 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.78■■□□□ 1.08
BRCA2P51587 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.78■■□□□ 1.08
BRCA2P51587 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BRCA2P51587 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BRCA2P51587 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BRCA2P51587 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BRCA2P51587 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC21.78■■□□□ 1.08
BRCA2P51587 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BRCA2P51587 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.78■■□□□ 1.08
BRCA2P51587 KRT8P41-201ENST00000533985 1514 ntBASIC21.78■■□□□ 1.08
BRCA2P51587 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BRCA2P51587 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
BRCA2P51587 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.78■■□□□ 1.08
BRCA2P51587 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BRCA2P51587 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BRCA2P51587 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BRCA2P51587 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
BRCA2P51587 AC092597.1-201ENST00000487352 616 ntBASIC21.78■■□□□ 1.08
BRCA2P51587 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.78■■□□□ 1.08
BRCA2P51587 AC011498.5-201ENST00000592027 486 ntBASIC21.78■■□□□ 1.08
BRCA2P51587 CALM3-211ENST00000598871 561 ntTSL 4 BASIC21.78■■□□□ 1.08
BRCA2P51587 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.78■■□□□ 1.08
BRCA2P51587 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
BRCA2P51587 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
BRCA2P51587 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.78■■□□□ 1.08
BRCA2P51587 KRT18P13-201ENST00000400056 1290 ntBASIC21.77■■□□□ 1.08
BRCA2P51587 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
BRCA2P51587 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BRCA2P51587 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
BRCA2P51587 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
BRCA2P51587 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
BRCA2P51587 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BRCA2P51587 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
BRCA2P51587 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
BRCA2P51587 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
BRCA2P51587 PMS2P1-201ENST00000431037 1228 ntBASIC21.77■■□□□ 1.07
BRCA2P51587 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC21.77■■□□□ 1.07
BRCA2P51587 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.77■■□□□ 1.07
BRCA2P51587 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
BRCA2P51587 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
BRCA2P51587 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.76■■□□□ 1.07
BRCA2P51587 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.76■■□□□ 1.07
BRCA2P51587 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
BRCA2P51587 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
BRCA2P51587 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BRCA2P51587 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BRCA2P51587 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
BRCA2P51587 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BRCA2P51587 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
BRCA2P51587 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
BRCA2P51587 AC140113.3-201ENST00000605663 199 ntBASIC21.76■■□□□ 1.07
BRCA2P51587 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BRCA2P51587 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.76■■□□□ 1.07
BRCA2P51587 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.76■■□□□ 1.07
BRCA2P51587 AL160237.2-201ENST00000556165 472 ntBASIC21.76■■□□□ 1.07
BRCA2P51587 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
BRCA2P51587 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.75■■□□□ 1.07
BRCA2P51587 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.75■■□□□ 1.07
BRCA2P51587 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BRCA2P51587 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
BRCA2P51587 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms