Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB28P51157 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB28P51157 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB28P51157 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB28P51157 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RAB28P51157 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RAB28P51157 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RAB28P51157 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB28P51157 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB28P51157 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RAB28P51157 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB28P51157 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB28P51157 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB28P51157 FAM197Y1-201ENST00000421178 764 ntBASIC18.79■□□□□ 0.6
RAB28P51157 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.79■□□□□ 0.6
RAB28P51157 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.79■□□□□ 0.6
RAB28P51157 CR392000.1-201ENST00000624770 1228 ntBASIC18.79■□□□□ 0.6
RAB28P51157 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB28P51157 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB28P51157 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB28P51157 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB28P51157 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RAB28P51157 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB28P51157 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB28P51157 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB28P51157 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB28P51157 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RAB28P51157 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB28P51157 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.78■□□□□ 0.6
RAB28P51157 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RAB28P51157 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.78■□□□□ 0.6
RAB28P51157 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB28P51157 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB28P51157 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB28P51157 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB28P51157 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB28P51157 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB28P51157 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
RAB28P51157 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB28P51157 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB28P51157 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB28P51157 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.78■□□□□ 0.6
RAB28P51157 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.78■□□□□ 0.6
RAB28P51157 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB28P51157 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB28P51157 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB28P51157 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB28P51157 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.78■□□□□ 0.6
RAB28P51157 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB28P51157 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.77■□□□□ 0.6
RAB28P51157 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB28P51157 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB28P51157 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB28P51157 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
RAB28P51157 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB28P51157 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB28P51157 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB28P51157 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB28P51157 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
RAB28P51157 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.77■□□□□ 0.6
RAB28P51157 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB28P51157 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.77■□□□□ 0.6
RAB28P51157 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB28P51157 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.77■□□□□ 0.6
RAB28P51157 AC026271.3-201ENST00000571884 352 ntBASIC18.77■□□□□ 0.6
RAB28P51157 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
RAB28P51157 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.77■□□□□ 0.6
RAB28P51157 AC131212.4-201ENST00000623606 975 ntBASIC18.77■□□□□ 0.6
RAB28P51157 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.77■□□□□ 0.6
RAB28P51157 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB28P51157 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RAB28P51157 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB28P51157 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.77■□□□□ 0.6
RAB28P51157 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB28P51157 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RAB28P51157 ZNF815P-204ENST00000434898 1737 ntBASIC18.77■□□□□ 0.59
RAB28P51157 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RAB28P51157 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB28P51157 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RAB28P51157 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
RAB28P51157 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB28P51157 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.76■□□□□ 0.59
RAB28P51157 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB28P51157 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.76■□□□□ 0.59
RAB28P51157 SNORA78-201ENST00000459373 127 ntBASIC18.76■□□□□ 0.59
RAB28P51157 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.76■□□□□ 0.59
RAB28P51157 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB28P51157 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.76■□□□□ 0.59
RAB28P51157 MIR4497-201ENST00000583208 89 ntBASIC18.76■□□□□ 0.59
RAB28P51157 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.76■□□□□ 0.59
RAB28P51157 AL031985.4-201ENST00000642138 673 ntBASIC18.76■□□□□ 0.59
RAB28P51157 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB28P51157 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB28P51157 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.76■□□□□ 0.59
RAB28P51157 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB28P51157 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB28P51157 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.75■□□□□ 0.59
RAB28P51157 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB28P51157 AL158211.5-201ENST00000623583 2518 ntBASIC18.75■□□□□ 0.59
RAB28P51157 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms