Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MMP13P45452 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
MMP13P45452 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.18■□□□□ 0.82
MMP13P45452 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP13P45452 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
MMP13P45452 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.18■□□□□ 0.82
MMP13P45452 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MMP13P45452 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.18■□□□□ 0.82
MMP13P45452 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MMP13P45452 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.18■□□□□ 0.82
MMP13P45452 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.18■□□□□ 0.82
MMP13P45452 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP13P45452 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.18■□□□□ 0.82
MMP13P45452 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MMP13P45452 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MMP13P45452 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
MMP13P45452 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP13P45452 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.18■□□□□ 0.82
MMP13P45452 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP13P45452 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
MMP13P45452 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MMP13P45452 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MMP13P45452 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.17■□□□□ 0.82
MMP13P45452 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MMP13P45452 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.17■□□□□ 0.82
MMP13P45452 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.17■□□□□ 0.82
MMP13P45452 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MMP13P45452 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MMP13P45452 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.17■□□□□ 0.82
MMP13P45452 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.17■□□□□ 0.82
MMP13P45452 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.17■□□□□ 0.82
MMP13P45452 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
MMP13P45452 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.17■□□□□ 0.82
MMP13P45452 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.17■□□□□ 0.82
MMP13P45452 AC008403.3-201ENST00000598924 454 ntBASIC20.17■□□□□ 0.82
MMP13P45452 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.17■□□□□ 0.82
MMP13P45452 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MMP13P45452 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MMP13P45452 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.17■□□□□ 0.82
MMP13P45452 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MMP13P45452 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
MMP13P45452 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
MMP13P45452 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MMP13P45452 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MMP13P45452 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MMP13P45452 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MMP13P45452 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.17■□□□□ 0.82
MMP13P45452 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP13P45452 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.16■□□□□ 0.82
MMP13P45452 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP13P45452 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
MMP13P45452 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP13P45452 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MMP13P45452 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.16■□□□□ 0.82
MMP13P45452 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP13P45452 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
MMP13P45452 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
MMP13P45452 AC026366.1-201ENST00000488803 879 ntBASIC20.16■□□□□ 0.82
MMP13P45452 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.16■□□□□ 0.82
MMP13P45452 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.16■□□□□ 0.82
MMP13P45452 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
MMP13P45452 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP13P45452 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.16■□□□□ 0.82
MMP13P45452 AP001271.2-201ENST00000624018 1556 ntBASIC20.16■□□□□ 0.82
MMP13P45452 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
MMP13P45452 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MMP13P45452 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.16■□□□□ 0.82
MMP13P45452 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
MMP13P45452 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.16■□□□□ 0.82
MMP13P45452 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.16■□□□□ 0.82
MMP13P45452 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MMP13P45452 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MMP13P45452 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
MMP13P45452 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MMP13P45452 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.15■□□□□ 0.82
MMP13P45452 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MMP13P45452 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
MMP13P45452 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
MMP13P45452 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MMP13P45452 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MMP13P45452 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
MMP13P45452 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.15■□□□□ 0.82
MMP13P45452 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.15■□□□□ 0.82
MMP13P45452 POM121L13P-201ENST00000422362 380 ntBASIC20.15■□□□□ 0.82
MMP13P45452 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.15■□□□□ 0.82
MMP13P45452 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
MMP13P45452 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
MMP13P45452 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MMP13P45452 AC018553.1-201ENST00000616682 1458 ntBASIC20.15■□□□□ 0.82
MMP13P45452 AC116351.2-201ENST00000606540 1585 ntBASIC20.15■□□□□ 0.82
MMP13P45452 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
MMP13P45452 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.15■□□□□ 0.82
MMP13P45452 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MMP13P45452 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
MMP13P45452 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MMP13P45452 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
MMP13P45452 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MMP13P45452 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MMP13P45452 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
MMP13P45452 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms