Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
CHRNA4P43681 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA4P43681 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA4P43681 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA4P43681 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA4P43681 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA4P43681 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA4P43681 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CHRNA4P43681 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.6■□□□□ 0.73
CHRNA4P43681 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA4P43681 ZNF815P-204ENST00000434898 1737 ntBASIC19.6■□□□□ 0.73
CHRNA4P43681 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA4P43681 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CHRNA4P43681 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA4P43681 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.6■□□□□ 0.73
CHRNA4P43681 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.6■□□□□ 0.73
CHRNA4P43681 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.6■□□□□ 0.73
CHRNA4P43681 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CHRNA4P43681 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.6■□□□□ 0.73
CHRNA4P43681 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.6■□□□□ 0.73
CHRNA4P43681 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.6■□□□□ 0.73
CHRNA4P43681 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA4P43681 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.6■□□□□ 0.73
CHRNA4P43681 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA4P43681 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CHRNA4P43681 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA4P43681 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA4P43681 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA4P43681 LINC01465-201ENST00000408887 1940 ntBASIC19.59■□□□□ 0.73
CHRNA4P43681 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.59■□□□□ 0.73
CHRNA4P43681 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CHRNA4P43681 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA4P43681 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA4P43681 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA4P43681 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.59■□□□□ 0.73
CHRNA4P43681 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CHRNA4P43681 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.59■□□□□ 0.73
CHRNA4P43681 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CHRNA4P43681 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.59■□□□□ 0.73
CHRNA4P43681 C1QBPP2-201ENST00000528754 825 ntBASIC19.59■□□□□ 0.73
CHRNA4P43681 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.59■□□□□ 0.73
CHRNA4P43681 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CHRNA4P43681 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.59■□□□□ 0.73
CHRNA4P43681 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA4P43681 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CHRNA4P43681 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CHRNA4P43681 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.59■□□□□ 0.73
CHRNA4P43681 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.59■□□□□ 0.73
CHRNA4P43681 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.59■□□□□ 0.73
CHRNA4P43681 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CHRNA4P43681 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CHRNA4P43681 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHRNA4P43681 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.73
CHRNA4P43681 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.58■□□□□ 0.73
CHRNA4P43681 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHRNA4P43681 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHRNA4P43681 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHRNA4P43681 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHRNA4P43681 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.58■□□□□ 0.72
CHRNA4P43681 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.58■□□□□ 0.72
CHRNA4P43681 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.58■□□□□ 0.72
CHRNA4P43681 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.58■□□□□ 0.72
CHRNA4P43681 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.58■□□□□ 0.72
CHRNA4P43681 ITM2C-210ENST00000620962 501 ntBASIC19.58■□□□□ 0.72
CHRNA4P43681 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.58■□□□□ 0.72
CHRNA4P43681 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.58■□□□□ 0.72
CHRNA4P43681 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHRNA4P43681 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHRNA4P43681 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.58■□□□□ 0.72
CHRNA4P43681 SDHAP1-207ENST00000440850 2000 ntBASIC19.58■□□□□ 0.72
CHRNA4P43681 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNA4P43681 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNA4P43681 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNA4P43681 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNA4P43681 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNA4P43681 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.57■□□□□ 0.72
CHRNA4P43681 PRORSD1P-201ENST00000295112 541 ntBASIC19.57■□□□□ 0.72
CHRNA4P43681 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.57■□□□□ 0.72
CHRNA4P43681 KRT18P29-201ENST00000397031 1267 ntBASIC19.57■□□□□ 0.72
CHRNA4P43681 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNA4P43681 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CHRNA4P43681 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CHRNA4P43681 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.57■□□□□ 0.72
CHRNA4P43681 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.57■□□□□ 0.72
CHRNA4P43681 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNA4P43681 AC087289.5-201ENST00000586076 3175 ntBASIC19.57■□□□□ 0.72
CHRNA4P43681 AC104417.2-201ENST00000562989 1793 ntBASIC19.57■□□□□ 0.72
CHRNA4P43681 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.57■□□□□ 0.72
CHRNA4P43681 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CHRNA4P43681 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CHRNA4P43681 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.57■□□□□ 0.72
CHRNA4P43681 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CHRNA4P43681 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNA4P43681 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CHRNA4P43681 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNA4P43681 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CHRNA4P43681 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNA4P43681 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.56■□□□□ 0.72
CHRNA4P43681 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNA4P43681 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms