Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC1A1P43005 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC1A1P43005 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SLC1A1P43005 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC1A1P43005 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC1A1P43005 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SLC1A1P43005 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC1A1P43005 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
SLC1A1P43005 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.33■□□□□ 0.85
SLC1A1P43005 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC1A1P43005 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC1A1P43005 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC1A1P43005 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC1A1P43005 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC1A1P43005 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.33■□□□□ 0.85
SLC1A1P43005 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC1A1P43005 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.33■□□□□ 0.85
SLC1A1P43005 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.33■□□□□ 0.85
SLC1A1P43005 AL161938.1-201ENST00000569833 2180 ntBASIC20.33■□□□□ 0.85
SLC1A1P43005 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.33■□□□□ 0.84
SLC1A1P43005 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.33■□□□□ 0.84
SLC1A1P43005 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC1A1P43005 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC1A1P43005 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.33■□□□□ 0.84
SLC1A1P43005 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SLC1A1P43005 AC093503.3-201ENST00000624917 2352 ntBASIC20.32■□□□□ 0.84
SLC1A1P43005 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC1A1P43005 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC1A1P43005 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC1A1P43005 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC1A1P43005 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC1A1P43005 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC1A1P43005 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC1A1P43005 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC1A1P43005 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC1A1P43005 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.32■□□□□ 0.84
SLC1A1P43005 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC1A1P43005 AL138781.1-201ENST00000566567 1274 ntBASIC20.32■□□□□ 0.84
SLC1A1P43005 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.32■□□□□ 0.84
SLC1A1P43005 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC1A1P43005 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.32■□□□□ 0.84
SLC1A1P43005 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.32■□□□□ 0.84
SLC1A1P43005 AC083880.1-201ENST00000608266 535 ntBASIC20.32■□□□□ 0.84
SLC1A1P43005 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC1A1P43005 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC1A1P43005 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC1A1P43005 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
SLC1A1P43005 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC1A1P43005 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC1A1P43005 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC1A1P43005 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC1A1P43005 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A1P43005 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A1P43005 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC1A1P43005 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SLC1A1P43005 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A1P43005 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A1P43005 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A1P43005 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A1P43005 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A1P43005 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A1P43005 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A1P43005 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.31■□□□□ 0.84
SLC1A1P43005 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SLC1A1P43005 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SLC1A1P43005 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A1P43005 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A1P43005 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC1A1P43005 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC1A1P43005 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC1A1P43005 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
SLC1A1P43005 KRT18P16-201ENST00000510337 1294 ntBASIC20.31■□□□□ 0.84
SLC1A1P43005 AC133041.1-202ENST00000642053 222 ntBASIC20.31■□□□□ 0.84
SLC1A1P43005 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A1P43005 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A1P43005 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A1P43005 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.31■□□□□ 0.84
SLC1A1P43005 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A1P43005 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A1P43005 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A1P43005 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A1P43005 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.31■□□□□ 0.84
SLC1A1P43005 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC1A1P43005 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC1A1P43005 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.3■□□□□ 0.84
SLC1A1P43005 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A1P43005 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A1P43005 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A1P43005 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC1A1P43005 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A1P43005 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC1A1P43005 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC1A1P43005 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.3■□□□□ 0.84
SLC1A1P43005 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.3■□□□□ 0.84
SLC1A1P43005 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC1A1P43005 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC1A1P43005 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A1P43005 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SLC1A1P43005 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A1P43005 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms