Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCNFP41002 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCNFP41002 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.52■□□□□ 0.72
CCNFP41002 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCNFP41002 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.52■□□□□ 0.72
CCNFP41002 AC060766.5-201ENST00000590539 871 ntBASIC19.52■□□□□ 0.72
CCNFP41002 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCNFP41002 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCNFP41002 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCNFP41002 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCNFP41002 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.52■□□□□ 0.72
CCNFP41002 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCNFP41002 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.52■□□□□ 0.71
CCNFP41002 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCNFP41002 NEFHP1-201ENST00000412845 2629 ntBASIC19.52■□□□□ 0.71
CCNFP41002 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.52■□□□□ 0.71
CCNFP41002 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
CCNFP41002 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCNFP41002 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.51■□□□□ 0.71
CCNFP41002 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CCNFP41002 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCNFP41002 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCNFP41002 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CCNFP41002 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.51■□□□□ 0.71
CCNFP41002 AC005829.2-201ENST00000571422 1056 ntBASIC19.51■□□□□ 0.71
CCNFP41002 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCNFP41002 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.51■□□□□ 0.71
CCNFP41002 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCNFP41002 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCNFP41002 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCNFP41002 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
CCNFP41002 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.51■□□□□ 0.71
CCNFP41002 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCNFP41002 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CCNFP41002 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCNFP41002 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.51■□□□□ 0.71
CCNFP41002 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CCNFP41002 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCNFP41002 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.51■□□□□ 0.71
CCNFP41002 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCNFP41002 AL161938.1-201ENST00000569833 2180 ntBASIC19.5■□□□□ 0.71
CCNFP41002 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCNFP41002 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCNFP41002 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCNFP41002 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.5■□□□□ 0.71
CCNFP41002 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.5■□□□□ 0.71
CCNFP41002 AC092368.3-202ENST00000574180 1591 ntBASIC19.5■□□□□ 0.71
CCNFP41002 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CCNFP41002 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCNFP41002 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCNFP41002 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCNFP41002 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCNFP41002 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCNFP41002 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCNFP41002 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCNFP41002 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCNFP41002 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.5■□□□□ 0.71
CCNFP41002 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.5■□□□□ 0.71
CCNFP41002 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCNFP41002 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.5■□□□□ 0.71
CCNFP41002 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.5■□□□□ 0.71
CCNFP41002 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCNFP41002 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCNFP41002 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.5■□□□□ 0.71
CCNFP41002 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCNFP41002 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCNFP41002 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.5■□□□□ 0.71
CCNFP41002 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.49■□□□□ 0.71
CCNFP41002 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCNFP41002 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCNFP41002 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCNFP41002 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.49■□□□□ 0.71
CCNFP41002 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCNFP41002 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCNFP41002 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CCNFP41002 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.49■□□□□ 0.71
CCNFP41002 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
CCNFP41002 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CCNFP41002 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.49■□□□□ 0.71
CCNFP41002 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.49■□□□□ 0.71
CCNFP41002 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.49■□□□□ 0.71
CCNFP41002 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.49■□□□□ 0.71
CCNFP41002 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CCNFP41002 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCNFP41002 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCNFP41002 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCNFP41002 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCNFP41002 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CCNFP41002 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.49■□□□□ 0.71
CCNFP41002 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCNFP41002 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCNFP41002 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.48■□□□□ 0.71
CCNFP41002 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCNFP41002 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CCNFP41002 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCNFP41002 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCNFP41002 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCNFP41002 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCNFP41002 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.48■□□□□ 0.71
CCNFP41002 PNMA6B-201ENST00000538162 1200 ntBASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms